Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
THBS4P35443 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
THBS4P35443 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.83□□□□□ -0.03
THBS4P35443 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.83□□□□□ -0.03
THBS4P35443 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.83□□□□□ -0.03
THBS4P35443 CICP6-201ENST00000457191 2729 ntBASIC14.83□□□□□ -0.04
THBS4P35443 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
THBS4P35443 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
THBS4P35443 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
THBS4P35443 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
THBS4P35443 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
THBS4P35443 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
THBS4P35443 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
THBS4P35443 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
THBS4P35443 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.83□□□□□ -0.04
THBS4P35443 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.83□□□□□ -0.04
THBS4P35443 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.83□□□□□ -0.04
THBS4P35443 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
THBS4P35443 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
THBS4P35443 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
THBS4P35443 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
THBS4P35443 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.83□□□□□ -0.04
THBS4P35443 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.83□□□□□ -0.04
THBS4P35443 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
THBS4P35443 TERC-201ENST00000602385 541 ntBASIC14.83□□□□□ -0.04
THBS4P35443 AC008667.4-201ENST00000607370 168 ntBASIC14.83□□□□□ -0.04
THBS4P35443 AC027601.4-201ENST00000611259 610 ntBASIC14.83□□□□□ -0.04
THBS4P35443 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
THBS4P35443 AL805961.1-202ENST00000641562 540 ntBASIC14.83□□□□□ -0.04
THBS4P35443 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
THBS4P35443 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
THBS4P35443 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
THBS4P35443 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
THBS4P35443 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
THBS4P35443 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
THBS4P35443 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
THBS4P35443 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.83□□□□□ -0.04
THBS4P35443 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.83□□□□□ -0.04
THBS4P35443 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.83□□□□□ -0.04
THBS4P35443 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
THBS4P35443 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
THBS4P35443 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
THBS4P35443 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
THBS4P35443 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
THBS4P35443 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.83□□□□□ -0.04
THBS4P35443 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
THBS4P35443 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
THBS4P35443 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.82□□□□□ -0.04
THBS4P35443 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
THBS4P35443 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
THBS4P35443 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
THBS4P35443 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
THBS4P35443 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.82□□□□□ -0.04
THBS4P35443 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
THBS4P35443 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.82□□□□□ -0.04
THBS4P35443 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
THBS4P35443 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
THBS4P35443 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
THBS4P35443 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
THBS4P35443 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
THBS4P35443 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
THBS4P35443 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
THBS4P35443 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
THBS4P35443 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.82□□□□□ -0.04
THBS4P35443 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.82□□□□□ -0.04
THBS4P35443 IGHV3-65-201ENST00000523210 341 ntBASIC14.82□□□□□ -0.04
THBS4P35443 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.82□□□□□ -0.04
THBS4P35443 AC140113.2-201ENST00000604370 208 ntBASIC14.82□□□□□ -0.04
THBS4P35443 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
THBS4P35443 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
THBS4P35443 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.82□□□□□ -0.04
THBS4P35443 UBALD1-205ENST00000590891 2641 ntBASIC14.82□□□□□ -0.04
THBS4P35443 TUBB8P12-201ENST00000308911 1335 ntBASIC14.82□□□□□ -0.04
THBS4P35443 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
THBS4P35443 TUBB7P-202ENST00000428444 1305 ntBASIC14.82□□□□□ -0.04
THBS4P35443 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.82□□□□□ -0.04
THBS4P35443 TUBB8P7-204ENST00000567960 1332 ntBASIC14.82□□□□□ -0.04
THBS4P35443 AL590787.1-201ENST00000568856 1315 ntBASIC14.82□□□□□ -0.04
THBS4P35443 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
THBS4P35443 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
THBS4P35443 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.82□□□□□ -0.04
THBS4P35443 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
THBS4P35443 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
THBS4P35443 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
THBS4P35443 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.82□□□□□ -0.04
THBS4P35443 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
THBS4P35443 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
THBS4P35443 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
THBS4P35443 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
THBS4P35443 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
THBS4P35443 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
THBS4P35443 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
THBS4P35443 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
THBS4P35443 AC008894.3-201ENST00000624324 3103 ntBASIC14.81□□□□□ -0.04
THBS4P35443 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
THBS4P35443 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
THBS4P35443 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
THBS4P35443 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
THBS4P35443 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
THBS4P35443 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms