Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
COL8A2P25067 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.2□□□□□ -0.14
COL8A2P25067 AC004461.1-201ENST00000412461 403 ntBASIC14.2□□□□□ -0.14
COL8A2P25067 METTL21AP1-201ENST00000438852 635 ntBASIC14.2□□□□□ -0.14
COL8A2P25067 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
COL8A2P25067 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.2□□□□□ -0.14
COL8A2P25067 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.2□□□□□ -0.14
COL8A2P25067 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COL8A2P25067 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
COL8A2P25067 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.2□□□□□ -0.14
COL8A2P25067 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.2□□□□□ -0.14
COL8A2P25067 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.2□□□□□ -0.14
COL8A2P25067 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
COL8A2P25067 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COL8A2P25067 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COL8A2P25067 AP001094.4-201ENST00000579008 2176 ntBASIC14.2□□□□□ -0.14
COL8A2P25067 AL021920.2-201ENST00000624828 1351 ntBASIC14.2□□□□□ -0.14
COL8A2P25067 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.2□□□□□ -0.14
COL8A2P25067 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COL8A2P25067 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
COL8A2P25067 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.2□□□□□ -0.14
COL8A2P25067 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COL8A2P25067 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COL8A2P25067 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
COL8A2P25067 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.19□□□□□ -0.14
COL8A2P25067 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.19□□□□□ -0.14
COL8A2P25067 AL121761.2-201ENST00000598007 1648 ntBASIC14.19□□□□□ -0.14
COL8A2P25067 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COL8A2P25067 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
COL8A2P25067 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
COL8A2P25067 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.19□□□□□ -0.14
COL8A2P25067 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.19□□□□□ -0.14
COL8A2P25067 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
COL8A2P25067 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.19□□□□□ -0.14
COL8A2P25067 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
COL8A2P25067 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
COL8A2P25067 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COL8A2P25067 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COL8A2P25067 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COL8A2P25067 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.19□□□□□ -0.14
COL8A2P25067 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.19□□□□□ -0.14
COL8A2P25067 AP000344.2-201ENST00000512987 629 ntBASIC14.19□□□□□ -0.14
COL8A2P25067 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.19□□□□□ -0.14
COL8A2P25067 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
COL8A2P25067 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.19□□□□□ -0.14
COL8A2P25067 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.19□□□□□ -0.14
COL8A2P25067 AC027796.2-201ENST00000575326 344 ntBASIC14.19□□□□□ -0.14
COL8A2P25067 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.19□□□□□ -0.14
COL8A2P25067 AC099522.2-201ENST00000607001 744 ntBASIC14.19□□□□□ -0.14
COL8A2P25067 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.19□□□□□ -0.14
COL8A2P25067 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
COL8A2P25067 AC079328.2-201ENST00000561241 3354 ntBASIC14.19□□□□□ -0.14
COL8A2P25067 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COL8A2P25067 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
COL8A2P25067 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COL8A2P25067 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COL8A2P25067 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.19□□□□□ -0.14
COL8A2P25067 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COL8A2P25067 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.19□□□□□ -0.14
COL8A2P25067 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COL8A2P25067 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
COL8A2P25067 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.18□□□□□ -0.14
COL8A2P25067 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL8A2P25067 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL8A2P25067 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL8A2P25067 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
COL8A2P25067 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.18□□□□□ -0.14
COL8A2P25067 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
COL8A2P25067 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL8A2P25067 KRT8P49-201ENST00000604166 1432 ntBASIC14.18□□□□□ -0.14
COL8A2P25067 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
COL8A2P25067 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL8A2P25067 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
COL8A2P25067 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.18□□□□□ -0.14
COL8A2P25067 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL8A2P25067 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL8A2P25067 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL8A2P25067 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
COL8A2P25067 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.18□□□□□ -0.14
COL8A2P25067 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
COL8A2P25067 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL8A2P25067 TIMM8BP1-201ENST00000452384 211 ntBASIC14.18□□□□□ -0.14
COL8A2P25067 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.18□□□□□ -0.14
COL8A2P25067 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
COL8A2P25067 MPDU1-223ENST00000582151 728 ntBASIC14.18□□□□□ -0.14
COL8A2P25067 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
COL8A2P25067 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.18□□□□□ -0.14
COL8A2P25067 AC026120.1-201ENST00000611536 926 ntBASIC14.18□□□□□ -0.14
COL8A2P25067 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
COL8A2P25067 AL513210.1-201ENST00000629608 234 ntBASIC14.18□□□□□ -0.14
COL8A2P25067 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL8A2P25067 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.18□□□□□ -0.14
COL8A2P25067 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.18□□□□□ -0.14
COL8A2P25067 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL8A2P25067 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL8A2P25067 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
COL8A2P25067 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
COL8A2P25067 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.18□□□□□ -0.14
COL8A2P25067 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL8A2P25067 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms