Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ERCC3P19447 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.44■□□□□ 0.7
ERCC3P19447 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ERCC3P19447 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ERCC3P19447 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ERCC3P19447 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.44■□□□□ 0.7
ERCC3P19447 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.44■□□□□ 0.7
ERCC3P19447 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC19.44■□□□□ 0.7
ERCC3P19447 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.44■□□□□ 0.7
ERCC3P19447 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ERCC3P19447 AC093214.1-201ENST00000511688 1107 ntBASIC19.44■□□□□ 0.7
ERCC3P19447 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.44■□□□□ 0.7
ERCC3P19447 AL512356.2-201ENST00000546955 174 ntBASIC19.44■□□□□ 0.7
ERCC3P19447 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.44■□□□□ 0.7
ERCC3P19447 AC051619.7-201ENST00000568314 623 ntBASIC19.44■□□□□ 0.7
ERCC3P19447 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.44■□□□□ 0.7
ERCC3P19447 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.44■□□□□ 0.7
ERCC3P19447 CROCCP2-202ENST00000412962 2773 ntBASIC19.44■□□□□ 0.7
ERCC3P19447 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
ERCC3P19447 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.44■□□□□ 0.7
ERCC3P19447 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ERCC3P19447 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
ERCC3P19447 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ERCC3P19447 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ERCC3P19447 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ERCC3P19447 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ERCC3P19447 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ERCC3P19447 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ERCC3P19447 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ERCC3P19447 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ERCC3P19447 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ERCC3P19447 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.43■□□□□ 0.7
ERCC3P19447 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ERCC3P19447 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.43■□□□□ 0.7
ERCC3P19447 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ERCC3P19447 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.43■□□□□ 0.7
ERCC3P19447 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.43■□□□□ 0.7
ERCC3P19447 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.43■□□□□ 0.7
ERCC3P19447 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ERCC3P19447 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.43■□□□□ 0.7
ERCC3P19447 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ERCC3P19447 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ERCC3P19447 AP001059.3-201ENST00000619053 235 ntBASIC19.43■□□□□ 0.7
ERCC3P19447 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ERCC3P19447 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ERCC3P19447 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ERCC3P19447 PCDHA12-202ENST00000613593 2588 ntBASIC19.43■□□□□ 0.7
ERCC3P19447 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.43■□□□□ 0.7
ERCC3P19447 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ERCC3P19447 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.43■□□□□ 0.7
ERCC3P19447 PRORSD1P-202ENST00000563365 2154 ntBASIC19.43■□□□□ 0.7
ERCC3P19447 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.43■□□□□ 0.7
ERCC3P19447 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ERCC3P19447 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ERCC3P19447 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
ERCC3P19447 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ERCC3P19447 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.43■□□□□ 0.7
ERCC3P19447 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC3P19447 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC3P19447 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC3P19447 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC3P19447 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC3P19447 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC3P19447 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC3P19447 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ERCC3P19447 AL139384.1-201ENST00000612143 3047 ntBASIC19.42■□□□□ 0.7
ERCC3P19447 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC3P19447 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC3P19447 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.42■□□□□ 0.7
ERCC3P19447 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ERCC3P19447 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC3P19447 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.42■□□□□ 0.7
ERCC3P19447 RBPMS2P1-201ENST00000437762 623 ntBASIC19.42■□□□□ 0.7
ERCC3P19447 RNA5SP421-201ENST00000516864 134 ntBASIC19.42■□□□□ 0.7
ERCC3P19447 AC069262.1-201ENST00000539058 672 ntBASIC19.42■□□□□ 0.7
ERCC3P19447 LINC01225-203ENST00000563550 1244 ntBASIC19.42■□□□□ 0.7
ERCC3P19447 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC3P19447 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.42■□□□□ 0.7
ERCC3P19447 AC138761.1-201ENST00000584393 385 ntBASIC19.42■□□□□ 0.7
ERCC3P19447 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.42■□□□□ 0.7
ERCC3P19447 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC3P19447 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC3P19447 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC3P19447 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC3P19447 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.42■□□□□ 0.7
ERCC3P19447 AC133963.1-201ENST00000504166 1679 ntBASIC19.42■□□□□ 0.7
ERCC3P19447 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
ERCC3P19447 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC3P19447 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC3P19447 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC19.42■□□□□ 0.7
ERCC3P19447 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERCC3P19447 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.42■□□□□ 0.7
ERCC3P19447 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.42■□□□□ 0.7
ERCC3P19447 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
ERCC3P19447 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ERCC3P19447 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ERCC3P19447 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ERCC3P19447 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ERCC3P19447 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ERCC3P19447 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms