Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.66■□□□□ 0.42
PDGFRAP16234 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PDGFRAP16234 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDGFRAP16234 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDGFRAP16234 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
PDGFRAP16234 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.65■□□□□ 0.42
PDGFRAP16234 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDGFRAP16234 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDGFRAP16234 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.65■□□□□ 0.42
PDGFRAP16234 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.65■□□□□ 0.42
PDGFRAP16234 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.65■□□□□ 0.42
PDGFRAP16234 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDGFRAP16234 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PDGFRAP16234 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PDGFRAP16234 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDGFRAP16234 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDGFRAP16234 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PDGFRAP16234 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDGFRAP16234 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PDGFRAP16234 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.65■□□□□ 0.42
PDGFRAP16234 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.65■□□□□ 0.42
PDGFRAP16234 AC007967.2-201ENST00000432613 625 ntBASIC17.65■□□□□ 0.42
PDGFRAP16234 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.65■□□□□ 0.42
PDGFRAP16234 PRSS29P-201ENST00000440800 595 ntBASIC17.65■□□□□ 0.42
PDGFRAP16234 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDGFRAP16234 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.65■□□□□ 0.42
PDGFRAP16234 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.65■□□□□ 0.42
PDGFRAP16234 MIR4751-201ENST00000578027 74 ntBASIC17.65■□□□□ 0.42
PDGFRAP16234 AC091167.2-201ENST00000579581 588 ntBASIC17.65■□□□□ 0.42
PDGFRAP16234 MIR4492-201ENST00000581627 80 ntBASIC17.65■□□□□ 0.42
PDGFRAP16234 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PDGFRAP16234 AC140113.2-201ENST00000604370 208 ntBASIC17.65■□□□□ 0.42
PDGFRAP16234 AC027601.4-201ENST00000611259 610 ntBASIC17.65■□□□□ 0.42
PDGFRAP16234 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.65■□□□□ 0.42
PDGFRAP16234 AC010654.1-201ENST00000615722 808 ntBASIC17.65■□□□□ 0.42
PDGFRAP16234 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.65■□□□□ 0.42
PDGFRAP16234 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDGFRAP16234 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
PDGFRAP16234 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
PDGFRAP16234 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PDGFRAP16234 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDGFRAP16234 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.65■□□□□ 0.42
PDGFRAP16234 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDGFRAP16234 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDGFRAP16234 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDGFRAP16234 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
PDGFRAP16234 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDGFRAP16234 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
PDGFRAP16234 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDGFRAP16234 AC131009.4-201ENST00000624048 1740 ntBASIC17.64■□□□□ 0.41
PDGFRAP16234 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
PDGFRAP16234 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.64■□□□□ 0.41
PDGFRAP16234 AL353732.1-201ENST00000569618 1459 ntBASIC17.64■□□□□ 0.41
PDGFRAP16234 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDGFRAP16234 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
PDGFRAP16234 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDGFRAP16234 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDGFRAP16234 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDGFRAP16234 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDGFRAP16234 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDGFRAP16234 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDGFRAP16234 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PDGFRAP16234 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDGFRAP16234 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.64■□□□□ 0.41
PDGFRAP16234 MED15P5-201ENST00000423150 992 ntBASIC17.64■□□□□ 0.41
PDGFRAP16234 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDGFRAP16234 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.64■□□□□ 0.41
PDGFRAP16234 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDGFRAP16234 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.64■□□□□ 0.41
PDGFRAP16234 HLA-A-202ENST00000376806 1854 ntBASIC17.64■□□□□ 0.41
PDGFRAP16234 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDGFRAP16234 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDGFRAP16234 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDGFRAP16234 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.64■□□□□ 0.41
PDGFRAP16234 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.64■□□□□ 0.41
PDGFRAP16234 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDGFRAP16234 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDGFRAP16234 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.64■□□□□ 0.41
PDGFRAP16234 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDGFRAP16234 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.64■□□□□ 0.41
PDGFRAP16234 SLC22A20-204ENST00000530038 1673 ntBASIC17.64■□□□□ 0.41
PDGFRAP16234 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.64■□□□□ 0.41
PDGFRAP16234 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDGFRAP16234 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDGFRAP16234 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDGFRAP16234 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDGFRAP16234 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDGFRAP16234 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDGFRAP16234 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.63■□□□□ 0.41
PDGFRAP16234 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDGFRAP16234 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDGFRAP16234 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.63■□□□□ 0.41
PDGFRAP16234 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDGFRAP16234 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
PDGFRAP16234 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDGFRAP16234 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDGFRAP16234 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.63■□□□□ 0.41
PDGFRAP16234 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.63■□□□□ 0.41
PDGFRAP16234 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.63■□□□□ 0.41
PDGFRAP16234 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms