Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.15□□□□□ -0.3
CD28P10747 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD28P10747 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CD28P10747 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CD28P10747 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CD28P10747 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.15□□□□□ -0.3
CD28P10747 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CD28P10747 RARRES2P8-201ENST00000566335 367 ntBASIC13.15□□□□□ -0.3
CD28P10747 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.15□□□□□ -0.3
CD28P10747 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.15□□□□□ -0.3
CD28P10747 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD28P10747 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD28P10747 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD28P10747 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD28P10747 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
CD28P10747 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD28P10747 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD28P10747 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CD28P10747 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CD28P10747 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
CD28P10747 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD28P10747 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CD28P10747 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.15□□□□□ -0.31
CD28P10747 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
CD28P10747 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CD28P10747 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
CD28P10747 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CD28P10747 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CD28P10747 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC13.14□□□□□ -0.31
CD28P10747 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD28P10747 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CD28P10747 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD28P10747 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CD28P10747 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
CD28P10747 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
CD28P10747 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD28P10747 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD28P10747 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC13.14□□□□□ -0.31
CD28P10747 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD28P10747 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD28P10747 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.14□□□□□ -0.31
CD28P10747 KRT18P32-201ENST00000424695 1287 ntBASIC13.14□□□□□ -0.31
CD28P10747 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CD28P10747 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.14□□□□□ -0.31
CD28P10747 AC243562.1-201ENST00000560672 389 ntBASIC13.14□□□□□ -0.31
CD28P10747 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.14□□□□□ -0.31
CD28P10747 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.14□□□□□ -0.31
CD28P10747 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.14□□□□□ -0.31
CD28P10747 AL161645.1-201ENST00000622716 1255 ntBASIC13.14□□□□□ -0.31
CD28P10747 AC009093.7-201ENST00000623853 1223 ntBASIC13.14□□□□□ -0.31
CD28P10747 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD28P10747 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CD28P10747 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.14□□□□□ -0.31
CD28P10747 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD28P10747 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD28P10747 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD28P10747 EGFEM1P-202ENST00000431685 1563 ntBASIC13.14□□□□□ -0.31
CD28P10747 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD28P10747 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CD28P10747 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC13.14□□□□□ -0.31
CD28P10747 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD28P10747 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC13.14□□□□□ -0.31
CD28P10747 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
CD28P10747 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CD28P10747 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CD28P10747 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD28P10747 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD28P10747 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CD28P10747 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CD28P10747 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CD28P10747 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD28P10747 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC13.13□□□□□ -0.31
CD28P10747 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD28P10747 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD28P10747 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC13.13□□□□□ -0.31
CD28P10747 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD28P10747 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC13.13□□□□□ -0.31
CD28P10747 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC13.13□□□□□ -0.31
CD28P10747 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD28P10747 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD28P10747 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CD28P10747 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD28P10747 AL353732.1-201ENST00000569618 1459 ntBASIC13.13□□□□□ -0.31
CD28P10747 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD28P10747 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD28P10747 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD28P10747 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.13□□□□□ -0.31
CD28P10747 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.13□□□□□ -0.31
CD28P10747 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CD28P10747 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD28P10747 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.13□□□□□ -0.31
CD28P10747 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CD28P10747 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC13.13□□□□□ -0.31
CD28P10747 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CD28P10747 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.13□□□□□ -0.31
CD28P10747 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.13□□□□□ -0.31
CD28P10747 AL009183.1-201ENST00000603760 355 ntBASIC13.13□□□□□ -0.31
CD28P10747 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.13□□□□□ -0.31
CD28P10747 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CD28P10747 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms