Protein–RNA interactions for Protein: P0DP25

CALM3, Calmodulin-3, humanhuman

Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3P0DP25 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CALM3P0DP25 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.5■□□□□ 0.71
CALM3P0DP25 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.5■□□□□ 0.71
CALM3P0DP25 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.5■□□□□ 0.71
CALM3P0DP25 AC021097.1-201ENST00000607902 574 ntBASIC19.5■□□□□ 0.71
CALM3P0DP25 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CALM3P0DP25 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CALM3P0DP25 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CALM3P0DP25 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.5■□□□□ 0.71
CALM3P0DP25 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CALM3P0DP25 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CALM3P0DP25 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CALM3P0DP25 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CALM3P0DP25 HLA-A-202ENST00000376806 1854 ntBASIC19.5■□□□□ 0.71
CALM3P0DP25 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CALM3P0DP25 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CALM3P0DP25 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CALM3P0DP25 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
CALM3P0DP25 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
CALM3P0DP25 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CALM3P0DP25 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CALM3P0DP25 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CALM3P0DP25 NKILA-202ENST00000614771 2598 ntBASIC19.49■□□□□ 0.71
CALM3P0DP25 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CALM3P0DP25 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.49■□□□□ 0.71
CALM3P0DP25 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CALM3P0DP25 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CALM3P0DP25 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CALM3P0DP25 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CALM3P0DP25 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CALM3P0DP25 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CALM3P0DP25 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CALM3P0DP25 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CALM3P0DP25 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CALM3P0DP25 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.49■□□□□ 0.71
CALM3P0DP25 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.49■□□□□ 0.71
CALM3P0DP25 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CALM3P0DP25 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC19.49■□□□□ 0.71
CALM3P0DP25 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.49■□□□□ 0.71
CALM3P0DP25 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.49■□□□□ 0.71
CALM3P0DP25 AL009183.1-201ENST00000603760 355 ntBASIC19.49■□□□□ 0.71
CALM3P0DP25 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.49■□□□□ 0.71
CALM3P0DP25 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CALM3P0DP25 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.49■□□□□ 0.71
CALM3P0DP25 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.49■□□□□ 0.71
CALM3P0DP25 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CALM3P0DP25 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CALM3P0DP25 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CALM3P0DP25 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CALM3P0DP25 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CALM3P0DP25 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
CALM3P0DP25 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CALM3P0DP25 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CALM3P0DP25 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CALM3P0DP25 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CALM3P0DP25 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CALM3P0DP25 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.48■□□□□ 0.71
CALM3P0DP25 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
CALM3P0DP25 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.48■□□□□ 0.71
CALM3P0DP25 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CALM3P0DP25 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CALM3P0DP25 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.48■□□□□ 0.71
CALM3P0DP25 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC19.48■□□□□ 0.71
CALM3P0DP25 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.48■□□□□ 0.71
CALM3P0DP25 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.48■□□□□ 0.71
CALM3P0DP25 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.48■□□□□ 0.71
CALM3P0DP25 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.48■□□□□ 0.71
CALM3P0DP25 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CALM3P0DP25 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CALM3P0DP25 MTDHP5-201ENST00000598980 586 ntBASIC19.48■□□□□ 0.71
CALM3P0DP25 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.48■□□□□ 0.71
CALM3P0DP25 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CALM3P0DP25 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CALM3P0DP25 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CALM3P0DP25 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CALM3P0DP25 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CALM3P0DP25 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CALM3P0DP25 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CALM3P0DP25 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CALM3P0DP25 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CALM3P0DP25 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CALM3P0DP25 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CALM3P0DP25 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CALM3P0DP25 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC19.48■□□□□ 0.71
CALM3P0DP25 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CALM3P0DP25 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CALM3P0DP25 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.48■□□□□ 0.71
CALM3P0DP25 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CALM3P0DP25 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CALM3P0DP25 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CALM3P0DP25 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CALM3P0DP25 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CALM3P0DP25 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.47■□□□□ 0.71
CALM3P0DP25 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CALM3P0DP25 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
CALM3P0DP25 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.47■□□□□ 0.71
CALM3P0DP25 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CALM3P0DP25 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
CALM3P0DP25 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CALM3P0DP25 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms