Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CD48P09326 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.43■□□□□ 0.38
CD48P09326 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.43■□□□□ 0.38
CD48P09326 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.43■□□□□ 0.38
CD48P09326 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CD48P09326 AL773604.1-201ENST00000617417 272 ntBASIC17.43■□□□□ 0.38
CD48P09326 GGTLC5P-201ENST00000617623 998 ntBASIC17.43■□□□□ 0.38
CD48P09326 AC004790.2-201ENST00000623588 572 ntBASIC17.43■□□□□ 0.38
CD48P09326 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CD48P09326 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CD48P09326 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CD48P09326 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.43■□□□□ 0.38
CD48P09326 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CD48P09326 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CD48P09326 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CD48P09326 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.43■□□□□ 0.38
CD48P09326 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CD48P09326 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CD48P09326 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CD48P09326 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CD48P09326 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD48P09326 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CD48P09326 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CD48P09326 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD48P09326 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD48P09326 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD48P09326 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD48P09326 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.42■□□□□ 0.38
CD48P09326 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.42■□□□□ 0.38
CD48P09326 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.42■□□□□ 0.38
CD48P09326 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD48P09326 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.42■□□□□ 0.38
CD48P09326 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.42■□□□□ 0.38
CD48P09326 SLC25A6P4-201ENST00000586535 553 ntBASIC17.42■□□□□ 0.38
CD48P09326 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.42■□□□□ 0.38
CD48P09326 AC005593.1-201ENST00000624894 515 ntBASIC17.42■□□□□ 0.38
CD48P09326 AL139011.1-202ENST00000642063 584 ntBASIC17.42■□□□□ 0.38
CD48P09326 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD48P09326 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.42■□□□□ 0.38
CD48P09326 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CD48P09326 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CD48P09326 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD48P09326 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD48P09326 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD48P09326 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.42■□□□□ 0.38
CD48P09326 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD48P09326 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.42■□□□□ 0.38
CD48P09326 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD48P09326 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD48P09326 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CD48P09326 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD48P09326 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.42■□□□□ 0.38
CD48P09326 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CD48P09326 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CD48P09326 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CD48P09326 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.41■□□□□ 0.38
CD48P09326 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CD48P09326 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.41■□□□□ 0.38
CD48P09326 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CD48P09326 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CD48P09326 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CD48P09326 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
CD48P09326 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CD48P09326 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CD48P09326 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CD48P09326 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
CD48P09326 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CD48P09326 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CD48P09326 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.41■□□□□ 0.38
CD48P09326 RPS2P28-201ENST00000314255 741 ntBASIC17.41■□□□□ 0.38
CD48P09326 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CD48P09326 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.41■□□□□ 0.38
CD48P09326 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.41■□□□□ 0.38
CD48P09326 AC116407.3-201ENST00000623905 1129 ntBASIC17.41■□□□□ 0.38
CD48P09326 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CD48P09326 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CD48P09326 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CD48P09326 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CD48P09326 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CD48P09326 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CD48P09326 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CD48P09326 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CD48P09326 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CD48P09326 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.41■□□□□ 0.38
CD48P09326 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CD48P09326 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CD48P09326 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CD48P09326 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.4■□□□□ 0.38
CD48P09326 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CD48P09326 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CD48P09326 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CD48P09326 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CD48P09326 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CD48P09326 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CD48P09326 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.4■□□□□ 0.38
CD48P09326 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CD48P09326 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CD48P09326 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CD48P09326 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CD48P09326 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms