Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.93■□□□□ 0.62
TPM3P06753 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TPM3P06753 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC18.93■□□□□ 0.62
TPM3P06753 AL049757.1-201ENST00000616842 1596 ntBASIC18.93■□□□□ 0.62
TPM3P06753 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TPM3P06753 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.93■□□□□ 0.62
TPM3P06753 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TPM3P06753 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TPM3P06753 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TPM3P06753 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TPM3P06753 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TPM3P06753 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TPM3P06753 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.92■□□□□ 0.62
TPM3P06753 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TPM3P06753 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TPM3P06753 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TPM3P06753 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.92■□□□□ 0.62
TPM3P06753 AC006058.4-201ENST00000624016 1670 ntBASIC18.92■□□□□ 0.62
TPM3P06753 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TPM3P06753 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.92■□□□□ 0.62
TPM3P06753 AC067930.6-201ENST00000623257 4947 ntBASIC18.92■□□□□ 0.62
TPM3P06753 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TPM3P06753 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC18.92■□□□□ 0.62
TPM3P06753 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.92■□□□□ 0.62
TPM3P06753 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TPM3P06753 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TPM3P06753 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.92■□□□□ 0.62
TPM3P06753 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TPM3P06753 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
TPM3P06753 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TPM3P06753 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TPM3P06753 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TPM3P06753 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TPM3P06753 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TPM3P06753 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TPM3P06753 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TPM3P06753 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
TPM3P06753 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TPM3P06753 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TPM3P06753 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPM3P06753 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.91■□□□□ 0.62
TPM3P06753 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TPM3P06753 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.91■□□□□ 0.62
TPM3P06753 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.91■□□□□ 0.62
TPM3P06753 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPM3P06753 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC18.91■□□□□ 0.62
TPM3P06753 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPM3P06753 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPM3P06753 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TPM3P06753 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.91■□□□□ 0.62
TPM3P06753 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TPM3P06753 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
TPM3P06753 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC18.91■□□□□ 0.62
TPM3P06753 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TPM3P06753 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPM3P06753 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.91■□□□□ 0.62
TPM3P06753 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPM3P06753 FAM220CP-201ENST00000395253 831 ntBASIC18.91■□□□□ 0.62
TPM3P06753 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.91■□□□□ 0.62
TPM3P06753 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.91■□□□□ 0.62
TPM3P06753 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TPM3P06753 GUSBP12-201ENST00000513727 720 ntBASIC18.91■□□□□ 0.62
TPM3P06753 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TPM3P06753 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.91■□□□□ 0.62
TPM3P06753 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPM3P06753 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.91■□□□□ 0.62
TPM3P06753 AC011558.1-201ENST00000623459 338 ntBASIC18.91■□□□□ 0.62
TPM3P06753 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TPM3P06753 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPM3P06753 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TPM3P06753 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPM3P06753 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPM3P06753 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPM3P06753 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPM3P06753 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPM3P06753 Z83836.1-201ENST00000624605 1642 ntBASIC18.91■□□□□ 0.62
TPM3P06753 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TPM3P06753 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPM3P06753 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPM3P06753 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPM3P06753 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC18.91■□□□□ 0.62
TPM3P06753 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPM3P06753 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPM3P06753 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TPM3P06753 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TPM3P06753 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.9■□□□□ 0.62
TPM3P06753 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
TPM3P06753 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TPM3P06753 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TPM3P06753 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.9■□□□□ 0.62
TPM3P06753 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TPM3P06753 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TPM3P06753 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TPM3P06753 AL135999.2-201ENST00000622438 1686 ntBASIC18.9■□□□□ 0.62
TPM3P06753 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TPM3P06753 HBZP1-201ENST00000354915 429 ntBASIC18.9■□□□□ 0.62
TPM3P06753 AL645728.1-201ENST00000366221 2101 ntBASIC18.9■□□□□ 0.62
TPM3P06753 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TPM3P06753 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.9■□□□□ 0.62
TPM3P06753 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms