Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC21.77■■□□□ 1.08
COL5A2P05997 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL5A2P05997 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC21.77■■□□□ 1.08
COL5A2P05997 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL5A2P05997 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL5A2P05997 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC21.77■■□□□ 1.08
COL5A2P05997 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL5A2P05997 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
COL5A2P05997 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
COL5A2P05997 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
COL5A2P05997 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC21.77■■□□□ 1.07
COL5A2P05997 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC21.77■■□□□ 1.07
COL5A2P05997 RHOA-206ENST00000454011 889 ntTSL 2 BASIC21.77■■□□□ 1.07
COL5A2P05997 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC21.77■■□□□ 1.07
COL5A2P05997 MFF-223ENST00000524634 647 ntTSL 2 BASIC21.77■■□□□ 1.07
COL5A2P05997 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC21.77■■□□□ 1.07
COL5A2P05997 AC026979.3-201ENST00000607315 403 ntBASIC21.77■■□□□ 1.07
COL5A2P05997 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
COL5A2P05997 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL5A2P05997 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL5A2P05997 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL5A2P05997 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
COL5A2P05997 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL5A2P05997 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
COL5A2P05997 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.76■■□□□ 1.07
COL5A2P05997 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
COL5A2P05997 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.76■■□□□ 1.07
COL5A2P05997 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
COL5A2P05997 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC21.76■■□□□ 1.07
COL5A2P05997 RPF1-202ENST00000370656 724 ntTSL 2 BASIC21.76■■□□□ 1.07
COL5A2P05997 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
COL5A2P05997 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
COL5A2P05997 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
COL5A2P05997 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC21.76■■□□□ 1.07
COL5A2P05997 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC21.76■■□□□ 1.07
COL5A2P05997 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL5A2P05997 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC21.76■■□□□ 1.07
COL5A2P05997 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC21.76■■□□□ 1.07
COL5A2P05997 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
COL5A2P05997 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
COL5A2P05997 AC015936.2-201ENST00000593177 259 ntBASIC21.76■■□□□ 1.07
COL5A2P05997 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL5A2P05997 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL5A2P05997 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL5A2P05997 AC008764.6-201ENST00000595909 2069 ntBASIC21.76■■□□□ 1.07
COL5A2P05997 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL5A2P05997 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC21.75■■□□□ 1.07
COL5A2P05997 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
COL5A2P05997 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL5A2P05997 AC120498.9-201ENST00000339021 3867 ntBASIC21.75■■□□□ 1.07
COL5A2P05997 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
COL5A2P05997 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
COL5A2P05997 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC21.75■■□□□ 1.07
COL5A2P05997 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL5A2P05997 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL5A2P05997 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC21.75■■□□□ 1.07
COL5A2P05997 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC21.75■■□□□ 1.07
COL5A2P05997 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC21.75■■□□□ 1.07
COL5A2P05997 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC21.75■■□□□ 1.07
COL5A2P05997 GALT-202ENST00000450095 1280 ntTSL 2 BASIC21.75■■□□□ 1.07
COL5A2P05997 FADS2-205ENST00000517839 469 ntTSL 3 BASIC21.75■■□□□ 1.07
COL5A2P05997 TMEM261P1-201ENST00000604899 340 ntBASIC21.75■■□□□ 1.07
COL5A2P05997 AC074044.1-201ENST00000609673 707 ntBASIC21.75■■□□□ 1.07
COL5A2P05997 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC21.75■■□□□ 1.07
COL5A2P05997 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC21.75■■□□□ 1.07
COL5A2P05997 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
COL5A2P05997 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
COL5A2P05997 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL5A2P05997 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
COL5A2P05997 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL5A2P05997 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
COL5A2P05997 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL5A2P05997 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
COL5A2P05997 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
COL5A2P05997 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL5A2P05997 RHBDF1P1-201ENST00000427504 1941 ntBASIC21.74■■□□□ 1.07
COL5A2P05997 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL5A2P05997 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL5A2P05997 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL5A2P05997 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
COL5A2P05997 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL5A2P05997 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
COL5A2P05997 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC21.74■■□□□ 1.07
COL5A2P05997 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC21.74■■□□□ 1.07
COL5A2P05997 AC025048.3-201ENST00000590609 569 ntBASIC21.74■■□□□ 1.07
COL5A2P05997 AC010319.3-201ENST00000597028 470 ntBASIC21.74■■□□□ 1.07
COL5A2P05997 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC21.74■■□□□ 1.07
COL5A2P05997 AL391069.4-201ENST00000609583 481 ntBASIC21.74■■□□□ 1.07
COL5A2P05997 AC005702.4-201ENST00000618393 416 ntBASIC21.74■■□□□ 1.07
COL5A2P05997 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC21.74■■□□□ 1.07
COL5A2P05997 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
COL5A2P05997 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
COL5A2P05997 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
COL5A2P05997 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC21.74■■□□□ 1.07
COL5A2P05997 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC21.74■■□□□ 1.07
COL5A2P05997 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL5A2P05997 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL5A2P05997 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL5A2P05997 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
COL5A2P05997 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms