Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 DDT-204ENST00000404092 805 ntTSL 3 BASIC20.17■□□□□ 0.82
APPP05067 AC004832.2-201ENST00000426397 482 ntBASIC20.17■□□□□ 0.82
APPP05067 AC074386.1-202ENST00000463561 864 ntBASIC20.17■□□□□ 0.82
APPP05067 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC20.17■□□□□ 0.82
APPP05067 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC20.17■□□□□ 0.82
APPP05067 PDPK2P-202ENST00000562415 1191 ntBASIC20.17■□□□□ 0.82
APPP05067 MPDU1-223ENST00000582151 728 ntBASIC20.17■□□□□ 0.82
APPP05067 MIR4515-201ENST00000584082 81 ntBASIC20.17■□□□□ 0.82
APPP05067 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.17■□□□□ 0.82
APPP05067 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.17■□□□□ 0.82
APPP05067 AC023511.2-201ENST00000618803 211 ntBASIC20.17■□□□□ 0.82
APPP05067 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
APPP05067 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
APPP05067 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
APPP05067 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
APPP05067 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
APPP05067 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
APPP05067 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
APPP05067 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
APPP05067 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
APPP05067 F11R-206ENST00000621309 4770 ntTSL 5 BASIC20.17■□□□□ 0.82
APPP05067 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
APPP05067 AC005915.1-201ENST00000624912 2018 ntBASIC20.17■□□□□ 0.82
APPP05067 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
APPP05067 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
APPP05067 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
APPP05067 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
APPP05067 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.17■□□□□ 0.82
APPP05067 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
APPP05067 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
APPP05067 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
APPP05067 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
APPP05067 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
APPP05067 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
APPP05067 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
APPP05067 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
APPP05067 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
APPP05067 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
APPP05067 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
APPP05067 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
APPP05067 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC20.16■□□□□ 0.82
APPP05067 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
APPP05067 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
APPP05067 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
APPP05067 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
APPP05067 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.16■□□□□ 0.82
APPP05067 AC010327.4-202ENST00000591484 748 ntBASIC20.16■□□□□ 0.82
APPP05067 MTDHP5-201ENST00000598980 586 ntBASIC20.16■□□□□ 0.82
APPP05067 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
APPP05067 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
APPP05067 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
APPP05067 REM2-202ENST00000536884 1331 ntTSL 2 BASIC20.16■□□□□ 0.82
APPP05067 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
APPP05067 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
APPP05067 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
APPP05067 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
APPP05067 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
APPP05067 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
APPP05067 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
APPP05067 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
APPP05067 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
APPP05067 AC131009.4-201ENST00000624048 1740 ntBASIC20.16■□□□□ 0.82
APPP05067 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
APPP05067 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
APPP05067 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
APPP05067 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
APPP05067 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
APPP05067 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
APPP05067 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20.15■□□□□ 0.82
APPP05067 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
APPP05067 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
APPP05067 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
APPP05067 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.15■□□□□ 0.82
APPP05067 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
APPP05067 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
APPP05067 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
APPP05067 NMU-203ENST00000507338 658 ntTSL 3 BASIC20.15■□□□□ 0.82
APPP05067 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC20.15■□□□□ 0.82
APPP05067 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
APPP05067 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.15■□□□□ 0.82
APPP05067 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.15■□□□□ 0.82
APPP05067 AL031432.2-201ENST00000566714 459 ntBASIC20.15■□□□□ 0.82
APPP05067 AL928711.1-201ENST00000570165 459 ntBASIC20.15■□□□□ 0.82
APPP05067 AC091167.2-201ENST00000579581 588 ntBASIC20.15■□□□□ 0.82
APPP05067 AL645728.2-201ENST00000641974 660 ntBASIC20.15■□□□□ 0.82
APPP05067 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
APPP05067 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
APPP05067 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC20.15■□□□□ 0.82
APPP05067 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
APPP05067 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
APPP05067 PKD1P5-201ENST00000532415 10291 ntBASIC20.15■□□□□ 0.82
APPP05067 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
APPP05067 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
APPP05067 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC20.15■□□□□ 0.82
APPP05067 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
APPP05067 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
APPP05067 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
APPP05067 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC20.14■□□□□ 0.82
APPP05067 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
APPP05067 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms