Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 AC084018.2-201ENST00000613093 2607 ntBASIC20.14■□□□□ 0.81
CHGBP05060 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CHGBP05060 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHGBP05060 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC20.14■□□□□ 0.81
CHGBP05060 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHGBP05060 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHGBP05060 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHGBP05060 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHGBP05060 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC20.13■□□□□ 0.81
CHGBP05060 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CHGBP05060 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHGBP05060 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHGBP05060 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC20.13■□□□□ 0.81
CHGBP05060 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CHGBP05060 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHGBP05060 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHGBP05060 PCDHA14-201ENST00000506751 2298 ntBASIC20.13■□□□□ 0.81
CHGBP05060 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC20.13■□□□□ 0.81
CHGBP05060 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CHGBP05060 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHGBP05060 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CHGBP05060 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CHGBP05060 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC20.13■□□□□ 0.81
CHGBP05060 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.13■□□□□ 0.81
CHGBP05060 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC20.13■□□□□ 0.81
CHGBP05060 AL691403.2-201ENST00000618460 490 ntBASIC20.13■□□□□ 0.81
CHGBP05060 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC20.13■□□□□ 0.81
CHGBP05060 AL031731.1-201ENST00000642131 2094 ntBASIC20.13■□□□□ 0.81
CHGBP05060 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHGBP05060 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHGBP05060 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHGBP05060 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CHGBP05060 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHGBP05060 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
CHGBP05060 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CHGBP05060 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CHGBP05060 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHGBP05060 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHGBP05060 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHGBP05060 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
CHGBP05060 GGT4P-201ENST00000623672 1708 ntBASIC20.13■□□□□ 0.81
CHGBP05060 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHGBP05060 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
CHGBP05060 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHGBP05060 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHGBP05060 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHGBP05060 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHGBP05060 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC20.12■□□□□ 0.81
CHGBP05060 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CHGBP05060 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CHGBP05060 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CHGBP05060 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHGBP05060 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHGBP05060 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHGBP05060 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHGBP05060 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
CHGBP05060 AL355306.1-201ENST00000415580 579 ntBASIC20.12■□□□□ 0.81
CHGBP05060 CDK2AP2P3-201ENST00000422476 372 ntBASIC20.12■□□□□ 0.81
CHGBP05060 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC20.12■□□□□ 0.81
CHGBP05060 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHGBP05060 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CHGBP05060 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC20.12■□□□□ 0.81
CHGBP05060 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC20.12■□□□□ 0.81
CHGBP05060 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
CHGBP05060 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC20.12■□□□□ 0.81
CHGBP05060 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC20.12■□□□□ 0.81
CHGBP05060 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
CHGBP05060 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHGBP05060 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC20.12■□□□□ 0.81
CHGBP05060 AC016027.1-202ENST00000607927 1699 ntBASIC20.12■□□□□ 0.81
CHGBP05060 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHGBP05060 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC20.12■□□□□ 0.81
CHGBP05060 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC20.12■□□□□ 0.81
CHGBP05060 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CHGBP05060 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHGBP05060 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC20.11■□□□□ 0.81
CHGBP05060 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CHGBP05060 KRT8P39-201ENST00000396270 1433 ntBASIC20.11■□□□□ 0.81
CHGBP05060 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CHGBP05060 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
CHGBP05060 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHGBP05060 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC20.11■□□□□ 0.81
CHGBP05060 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CHGBP05060 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC20.11■□□□□ 0.81
CHGBP05060 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CHGBP05060 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHGBP05060 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC20.11■□□□□ 0.81
CHGBP05060 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
CHGBP05060 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.11■□□□□ 0.81
CHGBP05060 MIR3687-2-201ENST00000577708 61 ntBASIC20.11■□□□□ 0.81
CHGBP05060 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.11■□□□□ 0.81
CHGBP05060 SIGLEC29P-201ENST00000599873 1114 ntBASIC20.11■□□□□ 0.81
CHGBP05060 AL596442.2-201ENST00000610240 980 ntBASIC20.11■□□□□ 0.81
CHGBP05060 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CHGBP05060 MIR3687-1-201ENST00000614492 61 ntBASIC20.11■□□□□ 0.81
CHGBP05060 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CHGBP05060 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC20.11■□□□□ 0.81
CHGBP05060 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHGBP05060 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC20.11■□□□□ 0.81
CHGBP05060 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms