Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LMNAP02545 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
LMNAP02545 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LMNAP02545 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LMNAP02545 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LMNAP02545 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LMNAP02545 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
LMNAP02545 SIGLEC16-201ENST00000599858 1437 ntBASIC17.64■□□□□ 0.41
LMNAP02545 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LMNAP02545 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.63■□□□□ 0.41
LMNAP02545 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LMNAP02545 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.63■□□□□ 0.41
LMNAP02545 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LMNAP02545 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LMNAP02545 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LMNAP02545 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
LMNAP02545 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LMNAP02545 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.63■□□□□ 0.41
LMNAP02545 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LMNAP02545 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LMNAP02545 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LMNAP02545 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LMNAP02545 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LMNAP02545 ELK2BP-201ENST00000415014 1224 ntBASIC17.63■□□□□ 0.41
LMNAP02545 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.63■□□□□ 0.41
LMNAP02545 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.63■□□□□ 0.41
LMNAP02545 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LMNAP02545 AC023141.5-201ENST00000458585 616 ntBASIC17.63■□□□□ 0.41
LMNAP02545 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.63■□□□□ 0.41
LMNAP02545 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
LMNAP02545 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LMNAP02545 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
LMNAP02545 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.63■□□□□ 0.41
LMNAP02545 AC008667.4-201ENST00000607370 168 ntBASIC17.63■□□□□ 0.41
LMNAP02545 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.63■□□□□ 0.41
LMNAP02545 AC004790.2-201ENST00000623588 572 ntBASIC17.63■□□□□ 0.41
LMNAP02545 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.63■□□□□ 0.41
LMNAP02545 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.63■□□□□ 0.41
LMNAP02545 AC105339.1-204ENST00000636249 355 ntBASIC17.63■□□□□ 0.41
LMNAP02545 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
LMNAP02545 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LMNAP02545 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LMNAP02545 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LMNAP02545 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LMNAP02545 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LMNAP02545 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LMNAP02545 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
LMNAP02545 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LMNAP02545 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LMNAP02545 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LMNAP02545 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.63■□□□□ 0.41
LMNAP02545 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
LMNAP02545 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.63■□□□□ 0.41
LMNAP02545 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LMNAP02545 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LMNAP02545 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
LMNAP02545 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LMNAP02545 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.62■□□□□ 0.41
LMNAP02545 AC006504.4-201ENST00000592118 1568 ntBASIC17.62■□□□□ 0.41
LMNAP02545 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LMNAP02545 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LMNAP02545 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.62■□□□□ 0.41
LMNAP02545 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LMNAP02545 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
LMNAP02545 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
LMNAP02545 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
LMNAP02545 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.62■□□□□ 0.41
LMNAP02545 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LMNAP02545 AC074386.1-202ENST00000463561 864 ntBASIC17.62■□□□□ 0.41
LMNAP02545 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LMNAP02545 KRT19P2-202ENST00000557173 1012 ntBASIC17.62■□□□□ 0.41
LMNAP02545 AC096734.2-201ENST00000562054 433 ntBASIC17.62■□□□□ 0.41
LMNAP02545 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
LMNAP02545 AL359881.2-201ENST00000602973 570 ntBASIC17.62■□□□□ 0.41
LMNAP02545 AL390955.2-201ENST00000603032 514 ntBASIC17.62■□□□□ 0.41
LMNAP02545 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.62■□□□□ 0.41
LMNAP02545 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.62■□□□□ 0.41
LMNAP02545 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LMNAP02545 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LMNAP02545 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
LMNAP02545 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LMNAP02545 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LMNAP02545 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
LMNAP02545 KRT8P47-201ENST00000604727 1398 ntBASIC17.62■□□□□ 0.41
LMNAP02545 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
LMNAP02545 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
LMNAP02545 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LMNAP02545 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.61■□□□□ 0.41
LMNAP02545 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LMNAP02545 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LMNAP02545 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LMNAP02545 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LMNAP02545 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.61■□□□□ 0.41
LMNAP02545 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
LMNAP02545 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
LMNAP02545 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LMNAP02545 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
LMNAP02545 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LMNAP02545 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LMNAP02545 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms