Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
IFNB1P01574 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IFNB1P01574 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
IFNB1P01574 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
IFNB1P01574 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.46■□□□□ 0.39
IFNB1P01574 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.46■□□□□ 0.39
IFNB1P01574 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
IFNB1P01574 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
IFNB1P01574 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
IFNB1P01574 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.46■□□□□ 0.39
IFNB1P01574 KRT16P4-201ENST00000453883 522 ntBASIC17.46■□□□□ 0.39
IFNB1P01574 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.46■□□□□ 0.39
IFNB1P01574 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.46■□□□□ 0.39
IFNB1P01574 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.46■□□□□ 0.39
IFNB1P01574 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IFNB1P01574 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
IFNB1P01574 ALOX12P2-203ENST00000570921 1945 ntBASIC17.46■□□□□ 0.39
IFNB1P01574 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
IFNB1P01574 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.46■□□□□ 0.39
IFNB1P01574 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IFNB1P01574 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
IFNB1P01574 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
IFNB1P01574 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
IFNB1P01574 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IFNB1P01574 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
IFNB1P01574 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.46■□□□□ 0.38
IFNB1P01574 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
IFNB1P01574 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.38
IFNB1P01574 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.38
IFNB1P01574 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
IFNB1P01574 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
IFNB1P01574 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
IFNB1P01574 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
IFNB1P01574 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
IFNB1P01574 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IFNB1P01574 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
IFNB1P01574 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.45■□□□□ 0.38
IFNB1P01574 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IFNB1P01574 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
IFNB1P01574 AC243591.1-201ENST00000452967 1364 ntBASIC17.45■□□□□ 0.38
IFNB1P01574 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
IFNB1P01574 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
IFNB1P01574 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
IFNB1P01574 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
IFNB1P01574 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
IFNB1P01574 AP002414.1-201ENST00000391405 1147 ntBASIC17.45■□□□□ 0.38
IFNB1P01574 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
IFNB1P01574 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.45■□□□□ 0.38
IFNB1P01574 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.45■□□□□ 0.38
IFNB1P01574 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
IFNB1P01574 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
IFNB1P01574 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.45■□□□□ 0.38
IFNB1P01574 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IFNB1P01574 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
IFNB1P01574 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
IFNB1P01574 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.45■□□□□ 0.38
IFNB1P01574 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
IFNB1P01574 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.45■□□□□ 0.38
IFNB1P01574 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.45■□□□□ 0.38
IFNB1P01574 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.45■□□□□ 0.38
IFNB1P01574 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
IFNB1P01574 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IFNB1P01574 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IFNB1P01574 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IFNB1P01574 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IFNB1P01574 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFNB1P01574 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IFNB1P01574 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
IFNB1P01574 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFNB1P01574 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IFNB1P01574 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.44■□□□□ 0.38
IFNB1P01574 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFNB1P01574 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFNB1P01574 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IFNB1P01574 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFNB1P01574 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
IFNB1P01574 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
IFNB1P01574 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
IFNB1P01574 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IFNB1P01574 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IFNB1P01574 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.44■□□□□ 0.38
IFNB1P01574 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
IFNB1P01574 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.44■□□□□ 0.38
IFNB1P01574 FOSL1P1-201ENST00000511041 816 ntBASIC17.44■□□□□ 0.38
IFNB1P01574 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.44■□□□□ 0.38
IFNB1P01574 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
IFNB1P01574 AL445228.2-201ENST00000605589 952 ntBASIC17.44■□□□□ 0.38
IFNB1P01574 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
IFNB1P01574 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.44■□□□□ 0.38
IFNB1P01574 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
IFNB1P01574 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IFNB1P01574 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.44■□□□□ 0.38
IFNB1P01574 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.44■□□□□ 0.38
IFNB1P01574 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFNB1P01574 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
IFNB1P01574 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.44■□□□□ 0.38
IFNB1P01574 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.44■□□□□ 0.38
IFNB1P01574 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IFNB1P01574 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFNB1P01574 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms