Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TIMP1P01033 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.95■□□□□ 0.46
TIMP1P01033 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.95■□□□□ 0.46
TIMP1P01033 AC104581.1-202ENST00000635932 2618 ntBASIC17.95■□□□□ 0.46
TIMP1P01033 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TIMP1P01033 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TIMP1P01033 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TIMP1P01033 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
TIMP1P01033 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.95■□□□□ 0.46
TIMP1P01033 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.95■□□□□ 0.46
TIMP1P01033 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TIMP1P01033 BOLA2P3-201ENST00000404566 256 ntBASIC17.95■□□□□ 0.46
TIMP1P01033 AL589987.1-201ENST00000453380 819 ntBASIC17.95■□□□□ 0.46
TIMP1P01033 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.95■□□□□ 0.46
TIMP1P01033 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TIMP1P01033 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TIMP1P01033 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.95■□□□□ 0.46
TIMP1P01033 MIR4538-201ENST00000581377 78 ntBASIC17.95■□□□□ 0.46
TIMP1P01033 AC008735.3-201ENST00000596646 500 ntBASIC17.95■□□□□ 0.46
TIMP1P01033 TMEM261P1-201ENST00000604899 340 ntBASIC17.95■□□□□ 0.46
TIMP1P01033 AC026979.3-201ENST00000607315 403 ntBASIC17.95■□□□□ 0.46
TIMP1P01033 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.95■□□□□ 0.46
TIMP1P01033 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TIMP1P01033 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
TIMP1P01033 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TIMP1P01033 AC098818.2-201ENST00000564925 2320 ntBASIC17.95■□□□□ 0.46
TIMP1P01033 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TIMP1P01033 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.95■□□□□ 0.46
TIMP1P01033 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TIMP1P01033 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.95■□□□□ 0.46
TIMP1P01033 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TIMP1P01033 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TIMP1P01033 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TIMP1P01033 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.94■□□□□ 0.46
TIMP1P01033 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.94■□□□□ 0.46
TIMP1P01033 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TIMP1P01033 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.94■□□□□ 0.46
TIMP1P01033 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.94■□□□□ 0.46
TIMP1P01033 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TIMP1P01033 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TIMP1P01033 AC116353.5-201ENST00000638148 1699 ntBASIC17.94■□□□□ 0.46
TIMP1P01033 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TIMP1P01033 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TIMP1P01033 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
TIMP1P01033 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TIMP1P01033 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.94■□□□□ 0.46
TIMP1P01033 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TIMP1P01033 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.94■□□□□ 0.46
TIMP1P01033 AC104989.1-201ENST00000519711 778 ntBASIC17.94■□□□□ 0.46
TIMP1P01033 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TIMP1P01033 AL109936.8-201ENST00000641772 604 ntBASIC17.94■□□□□ 0.46
TIMP1P01033 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.94■□□□□ 0.46
TIMP1P01033 AL671710.1-201ENST00000610245 2349 ntBASIC17.94■□□□□ 0.46
TIMP1P01033 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
TIMP1P01033 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TIMP1P01033 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TIMP1P01033 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TIMP1P01033 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.94■□□□□ 0.46
TIMP1P01033 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.94■□□□□ 0.46
TIMP1P01033 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TIMP1P01033 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TIMP1P01033 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TIMP1P01033 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TIMP1P01033 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TIMP1P01033 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TIMP1P01033 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.93■□□□□ 0.46
TIMP1P01033 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.93■□□□□ 0.46
TIMP1P01033 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.93■□□□□ 0.46
TIMP1P01033 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.93■□□□□ 0.46
TIMP1P01033 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TIMP1P01033 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TIMP1P01033 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TIMP1P01033 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TIMP1P01033 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TIMP1P01033 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TIMP1P01033 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
TIMP1P01033 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TIMP1P01033 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TIMP1P01033 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.93■□□□□ 0.46
TIMP1P01033 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.93■□□□□ 0.46
TIMP1P01033 BNIP3P42-201ENST00000454982 569 ntBASIC17.93■□□□□ 0.46
TIMP1P01033 CROCCP4-201ENST00000457096 498 ntBASIC17.93■□□□□ 0.46
TIMP1P01033 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TIMP1P01033 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.93■□□□□ 0.46
TIMP1P01033 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TIMP1P01033 RRP7BP-205ENST00000566851 833 ntBASIC17.93■□□□□ 0.46
TIMP1P01033 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
TIMP1P01033 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.93■□□□□ 0.46
TIMP1P01033 AC015936.2-201ENST00000593177 259 ntBASIC17.93■□□□□ 0.46
TIMP1P01033 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.93■□□□□ 0.46
TIMP1P01033 BNIP3P29-201ENST00000598302 571 ntBASIC17.93■□□□□ 0.46
TIMP1P01033 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.93■□□□□ 0.46
TIMP1P01033 AC011447.5-201ENST00000616168 564 ntBASIC17.93■□□□□ 0.46
TIMP1P01033 MIR6069-201ENST00000620069 79 ntBASIC17.93■□□□□ 0.46
TIMP1P01033 AL033527.5-201ENST00000641382 801 ntBASIC17.93■□□□□ 0.46
TIMP1P01033 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TIMP1P01033 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.93■□□□□ 0.46
TIMP1P01033 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TIMP1P01033 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TIMP1P01033 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms