Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 RN7SL471P-201ENST00000580476 299 ntBASIC14.13□□□□□ -0.15
SIX6O95475 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC14.13□□□□□ -0.15
SIX6O95475 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SIX6O95475 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC14.13□□□□□ -0.15
SIX6O95475 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC14.13□□□□□ -0.15
SIX6O95475 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SIX6O95475 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
SIX6O95475 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SIX6O95475 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SIX6O95475 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SIX6O95475 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.13□□□□□ -0.15
SIX6O95475 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.13□□□□□ -0.15
SIX6O95475 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SIX6O95475 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.13□□□□□ -0.15
SIX6O95475 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SIX6O95475 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SIX6O95475 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.13□□□□□ -0.15
SIX6O95475 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SIX6O95475 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
SIX6O95475 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.13□□□□□ -0.15
SIX6O95475 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SIX6O95475 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.12□□□□□ -0.15
SIX6O95475 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIX6O95475 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
SIX6O95475 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIX6O95475 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SIX6O95475 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.12□□□□□ -0.15
SIX6O95475 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIX6O95475 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIX6O95475 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SIX6O95475 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SIX6O95475 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.12□□□□□ -0.15
SIX6O95475 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIX6O95475 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.12□□□□□ -0.15
SIX6O95475 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.12□□□□□ -0.15
SIX6O95475 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.12□□□□□ -0.15
SIX6O95475 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SIX6O95475 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.12□□□□□ -0.15
SIX6O95475 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIX6O95475 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIX6O95475 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIX6O95475 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIX6O95475 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SIX6O95475 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SIX6O95475 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIX6O95475 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14.12□□□□□ -0.15
SIX6O95475 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SIX6O95475 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC14.12□□□□□ -0.15
SIX6O95475 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.12□□□□□ -0.15
SIX6O95475 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC14.12□□□□□ -0.15
SIX6O95475 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC14.12□□□□□ -0.15
SIX6O95475 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC14.12□□□□□ -0.15
SIX6O95475 AL137784.2-201ENST00000607332 1000 ntBASIC14.12□□□□□ -0.15
SIX6O95475 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SIX6O95475 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.12□□□□□ -0.15
SIX6O95475 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIX6O95475 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIX6O95475 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.12□□□□□ -0.15
SIX6O95475 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.12□□□□□ -0.15
SIX6O95475 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SIX6O95475 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIX6O95475 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SIX6O95475 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SIX6O95475 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIX6O95475 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.12□□□□□ -0.15
SIX6O95475 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIX6O95475 AC139749.1-202ENST00000617529 3139 ntBASIC14.12□□□□□ -0.15
SIX6O95475 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.12□□□□□ -0.15
SIX6O95475 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SIX6O95475 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SIX6O95475 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.12□□□□□ -0.15
SIX6O95475 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIX6O95475 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.12□□□□□ -0.15
SIX6O95475 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.12□□□□□ -0.15
SIX6O95475 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIX6O95475 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.12□□□□□ -0.15
SIX6O95475 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.12□□□□□ -0.15
SIX6O95475 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIX6O95475 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.12□□□□□ -0.15
SIX6O95475 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SIX6O95475 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SIX6O95475 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SIX6O95475 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SIX6O95475 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SIX6O95475 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SIX6O95475 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SIX6O95475 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SIX6O95475 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SIX6O95475 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.11□□□□□ -0.15
SIX6O95475 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SIX6O95475 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SIX6O95475 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SIX6O95475 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SIX6O95475 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SIX6O95475 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SIX6O95475 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SIX6O95475 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.11□□□□□ -0.15
SIX6O95475 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SIX6O95475 AL353719.1-201ENST00000566847 864 ntBASIC14.11□□□□□ -0.15
SIX6O95475 RARRES2P6-201ENST00000567333 442 ntBASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms