Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.93■□□□□ 0.3
VAPBO95292 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VAPBO95292 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VAPBO95292 TOP3BP1-201ENST00000420768 1380 ntBASIC16.93■□□□□ 0.3
VAPBO95292 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VAPBO95292 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.93■□□□□ 0.3
VAPBO95292 AC006277.1-201ENST00000624348 1610 ntBASIC16.93■□□□□ 0.3
VAPBO95292 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VAPBO95292 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.93■□□□□ 0.3
VAPBO95292 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
VAPBO95292 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VAPBO95292 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VAPBO95292 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VAPBO95292 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VAPBO95292 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VAPBO95292 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.93■□□□□ 0.3
VAPBO95292 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VAPBO95292 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.93■□□□□ 0.3
VAPBO95292 RPS2P1-201ENST00000434010 821 ntBASIC16.93■□□□□ 0.3
VAPBO95292 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.93■□□□□ 0.3
VAPBO95292 AC087163.2-201ENST00000457299 853 ntBASIC16.93■□□□□ 0.3
VAPBO95292 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
VAPBO95292 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.93■□□□□ 0.3
VAPBO95292 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
VAPBO95292 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
VAPBO95292 AF228730.7-201ENST00000641842 219 ntBASIC16.93■□□□□ 0.3
VAPBO95292 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.93■□□□□ 0.3
VAPBO95292 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VAPBO95292 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VAPBO95292 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VAPBO95292 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
VAPBO95292 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VAPBO95292 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VAPBO95292 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.93■□□□□ 0.3
VAPBO95292 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
VAPBO95292 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
VAPBO95292 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
VAPBO95292 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.92■□□□□ 0.3
VAPBO95292 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.92■□□□□ 0.3
VAPBO95292 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
VAPBO95292 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VAPBO95292 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VAPBO95292 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.92■□□□□ 0.3
VAPBO95292 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VAPBO95292 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VAPBO95292 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
VAPBO95292 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
VAPBO95292 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
VAPBO95292 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
VAPBO95292 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
VAPBO95292 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
VAPBO95292 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
VAPBO95292 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VAPBO95292 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.92■□□□□ 0.3
VAPBO95292 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
VAPBO95292 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.92■□□□□ 0.3
VAPBO95292 EMBP1-201ENST00000458200 901 ntBASIC16.92■□□□□ 0.3
VAPBO95292 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.92■□□□□ 0.3
VAPBO95292 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
VAPBO95292 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.92■□□□□ 0.3
VAPBO95292 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.92■□□□□ 0.3
VAPBO95292 AC073648.2-201ENST00000510116 352 ntBASIC16.92■□□□□ 0.3
VAPBO95292 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.92■□□□□ 0.3
VAPBO95292 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.92■□□□□ 0.3
VAPBO95292 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
VAPBO95292 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
VAPBO95292 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.92■□□□□ 0.3
VAPBO95292 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
VAPBO95292 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VAPBO95292 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.92■□□□□ 0.3
VAPBO95292 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.92■□□□□ 0.3
VAPBO95292 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.92■□□□□ 0.3
VAPBO95292 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
VAPBO95292 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
VAPBO95292 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
VAPBO95292 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.92■□□□□ 0.3
VAPBO95292 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
VAPBO95292 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
VAPBO95292 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
VAPBO95292 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VAPBO95292 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VAPBO95292 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
VAPBO95292 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VAPBO95292 AC002310.6-201ENST00000624451 1377 ntBASIC16.91■□□□□ 0.3
VAPBO95292 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VAPBO95292 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.91■□□□□ 0.3
VAPBO95292 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.91■□□□□ 0.3
VAPBO95292 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.91■□□□□ 0.3
VAPBO95292 AL162727.3-201ENST00000635661 2787 ntBASIC16.91■□□□□ 0.3
VAPBO95292 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VAPBO95292 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VAPBO95292 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
VAPBO95292 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VAPBO95292 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VAPBO95292 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.91■□□□□ 0.3
VAPBO95292 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.91■□□□□ 0.3
VAPBO95292 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VAPBO95292 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
VAPBO95292 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VAPBO95292 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms