Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PRKNO60260 AL671710.1-201ENST00000610245 2349 ntBASIC15.65■□□□□ 0.1
PRKNO60260 AL121761.2-201ENST00000598007 1648 ntBASIC15.65■□□□□ 0.1
PRKNO60260 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRKNO60260 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRKNO60260 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.64■□□□□ 0.09
PRKNO60260 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRKNO60260 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PRKNO60260 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRKNO60260 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRKNO60260 NKILA-202ENST00000614771 2598 ntBASIC15.64■□□□□ 0.09
PRKNO60260 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.64■□□□□ 0.09
PRKNO60260 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PRKNO60260 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRKNO60260 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRKNO60260 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.64■□□□□ 0.09
PRKNO60260 MIR1233-2-201ENST00000408138 82 ntBASIC15.64■□□□□ 0.09
PRKNO60260 MIR1233-1-201ENST00000408722 82 ntBASIC15.64■□□□□ 0.09
PRKNO60260 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.64■□□□□ 0.09
PRKNO60260 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.64■□□□□ 0.09
PRKNO60260 DNAJB3-201ENST00000446806 729 ntBASIC15.64■□□□□ 0.09
PRKNO60260 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.64■□□□□ 0.09
PRKNO60260 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.64■□□□□ 0.09
PRKNO60260 KRT8P49-201ENST00000604166 1432 ntBASIC15.64■□□□□ 0.09
PRKNO60260 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PRKNO60260 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRKNO60260 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.64■□□□□ 0.09
PRKNO60260 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.64■□□□□ 0.09
PRKNO60260 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.64■□□□□ 0.09
PRKNO60260 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.64■□□□□ 0.09
PRKNO60260 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.64■□□□□ 0.09
PRKNO60260 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.64■□□□□ 0.09
PRKNO60260 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PRKNO60260 AC099398.1-201ENST00000567919 2776 ntBASIC15.64■□□□□ 0.09
PRKNO60260 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.63■□□□□ 0.09
PRKNO60260 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PRKNO60260 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PRKNO60260 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PRKNO60260 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
PRKNO60260 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRKNO60260 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PRKNO60260 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PRKNO60260 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
PRKNO60260 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.63■□□□□ 0.09
PRKNO60260 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRKNO60260 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.63■□□□□ 0.09
PRKNO60260 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.63■□□□□ 0.09
PRKNO60260 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRKNO60260 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRKNO60260 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRKNO60260 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRKNO60260 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.63■□□□□ 0.09
PRKNO60260 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PRKNO60260 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.63■□□□□ 0.09
PRKNO60260 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRKNO60260 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.63■□□□□ 0.09
PRKNO60260 HMGA1P7-201ENST00000406908 502 ntBASIC15.63■□□□□ 0.09
PRKNO60260 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.63■□□□□ 0.09
PRKNO60260 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRKNO60260 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PRKNO60260 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.63■□□□□ 0.09
PRKNO60260 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.63■□□□□ 0.09
PRKNO60260 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.63■□□□□ 0.09
PRKNO60260 AC005412.3-201ENST00000580309 715 ntBASIC15.63■□□□□ 0.09
PRKNO60260 MIR4515-201ENST00000584082 81 ntBASIC15.63■□□□□ 0.09
PRKNO60260 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.63■□□□□ 0.09
PRKNO60260 GPALPP1-207ENST00000611650 899 ntBASIC15.63■□□□□ 0.09
PRKNO60260 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRKNO60260 AC078925.2-201ENST00000624013 1973 ntBASIC15.63■□□□□ 0.09
PRKNO60260 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
PRKNO60260 AL353732.1-201ENST00000569618 1459 ntBASIC15.63■□□□□ 0.09
PRKNO60260 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.63■□□□□ 0.09
PRKNO60260 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRKNO60260 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PRKNO60260 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
PRKNO60260 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PRKNO60260 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
PRKNO60260 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRKNO60260 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
PRKNO60260 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PRKNO60260 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PRKNO60260 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PRKNO60260 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
PRKNO60260 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.62■□□□□ 0.09
PRKNO60260 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PRKNO60260 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRKNO60260 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.62■□□□□ 0.09
PRKNO60260 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PRKNO60260 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRKNO60260 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PRKNO60260 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PRKNO60260 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PRKNO60260 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
PRKNO60260 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
PRKNO60260 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRKNO60260 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRKNO60260 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRKNO60260 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRKNO60260 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PRKNO60260 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms