Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NDUFS4O43181 AL353732.1-201ENST00000569618 1459 ntBASIC16.11■□□□□ 0.17
NDUFS4O43181 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NDUFS4O43181 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NDUFS4O43181 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
NDUFS4O43181 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NDUFS4O43181 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NDUFS4O43181 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
NDUFS4O43181 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
NDUFS4O43181 AL591424.1-201ENST00000442569 1213 ntBASIC16.11■□□□□ 0.17
NDUFS4O43181 FAM185BP-201ENST00000443595 716 ntBASIC16.11■□□□□ 0.17
NDUFS4O43181 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.11■□□□□ 0.17
NDUFS4O43181 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.11■□□□□ 0.17
NDUFS4O43181 AC140113.2-201ENST00000604370 208 ntBASIC16.11■□□□□ 0.17
NDUFS4O43181 ACTL9-202ENST00000612068 1252 ntBASIC16.11■□□□□ 0.17
NDUFS4O43181 AC010507.1-201ENST00000633895 436 ntBASIC16.11■□□□□ 0.17
NDUFS4O43181 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NDUFS4O43181 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NDUFS4O43181 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NDUFS4O43181 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.11■□□□□ 0.17
NDUFS4O43181 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NDUFS4O43181 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.11■□□□□ 0.17
NDUFS4O43181 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
NDUFS4O43181 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.11■□□□□ 0.17
NDUFS4O43181 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.1■□□□□ 0.17
NDUFS4O43181 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NDUFS4O43181 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NDUFS4O43181 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NDUFS4O43181 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NDUFS4O43181 AL603756.1-201ENST00000606511 2163 ntBASIC16.1■□□□□ 0.17
NDUFS4O43181 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NDUFS4O43181 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NDUFS4O43181 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NDUFS4O43181 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.1■□□□□ 0.17
NDUFS4O43181 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.1■□□□□ 0.17
NDUFS4O43181 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NDUFS4O43181 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NDUFS4O43181 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NDUFS4O43181 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
NDUFS4O43181 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NDUFS4O43181 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
NDUFS4O43181 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NDUFS4O43181 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NDUFS4O43181 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
NDUFS4O43181 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
NDUFS4O43181 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.1■□□□□ 0.17
NDUFS4O43181 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NDUFS4O43181 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NDUFS4O43181 MIR940-201ENST00000401276 94 ntBASIC16.1■□□□□ 0.17
NDUFS4O43181 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
NDUFS4O43181 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
NDUFS4O43181 RNA5SP416-201ENST00000516838 111 ntBASIC16.1■□□□□ 0.17
NDUFS4O43181 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.1■□□□□ 0.17
NDUFS4O43181 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.1■□□□□ 0.17
NDUFS4O43181 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.1■□□□□ 0.17
NDUFS4O43181 AC013467.2-201ENST00000605472 835 ntBASIC16.1■□□□□ 0.17
NDUFS4O43181 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.1■□□□□ 0.17
NDUFS4O43181 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NDUFS4O43181 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NDUFS4O43181 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NDUFS4O43181 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
NDUFS4O43181 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NDUFS4O43181 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NDUFS4O43181 SLC22A20-204ENST00000530038 1673 ntBASIC16.1■□□□□ 0.17
NDUFS4O43181 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.1■□□□□ 0.17
NDUFS4O43181 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NDUFS4O43181 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NDUFS4O43181 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NDUFS4O43181 AC131009.4-201ENST00000624048 1740 ntBASIC16.1■□□□□ 0.17
NDUFS4O43181 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NDUFS4O43181 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NDUFS4O43181 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NDUFS4O43181 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.1■□□□□ 0.17
NDUFS4O43181 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
NDUFS4O43181 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.1■□□□□ 0.17
NDUFS4O43181 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NDUFS4O43181 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NDUFS4O43181 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.1■□□□□ 0.17
NDUFS4O43181 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
NDUFS4O43181 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NDUFS4O43181 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NDUFS4O43181 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NDUFS4O43181 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
NDUFS4O43181 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NDUFS4O43181 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NDUFS4O43181 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.09■□□□□ 0.17
NDUFS4O43181 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.09■□□□□ 0.17
NDUFS4O43181 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NDUFS4O43181 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NDUFS4O43181 AC006277.1-201ENST00000624348 1610 ntBASIC16.09■□□□□ 0.17
NDUFS4O43181 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.09■□□□□ 0.17
NDUFS4O43181 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.09■□□□□ 0.17
NDUFS4O43181 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.09■□□□□ 0.17
NDUFS4O43181 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.09■□□□□ 0.17
NDUFS4O43181 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NDUFS4O43181 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NDUFS4O43181 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NDUFS4O43181 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NDUFS4O43181 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NDUFS4O43181 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms