Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CCDC188H7C350 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC188H7C350 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.52■□□□□ 0.4
CCDC188H7C350 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.52■□□□□ 0.4
CCDC188H7C350 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.4
CCDC188H7C350 AC004817.3-201ENST00000602957 2129 ntBASIC17.52■□□□□ 0.4
CCDC188H7C350 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC188H7C350 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CCDC188H7C350 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.52■□□□□ 0.4
CCDC188H7C350 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CCDC188H7C350 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC188H7C350 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC188H7C350 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC188H7C350 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.39
CCDC188H7C350 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.52■□□□□ 0.39
CCDC188H7C350 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
CCDC188H7C350 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC188H7C350 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.52■□□□□ 0.39
CCDC188H7C350 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC188H7C350 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC188H7C350 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC188H7C350 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.39
CCDC188H7C350 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC188H7C350 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC188H7C350 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC188H7C350 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CCDC188H7C350 AC006449.6-201ENST00000612330 2296 ntBASIC17.51■□□□□ 0.39
CCDC188H7C350 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC188H7C350 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC188H7C350 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC188H7C350 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC188H7C350 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC188H7C350 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CCDC188H7C350 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC188H7C350 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC188H7C350 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC188H7C350 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC188H7C350 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC188H7C350 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC188H7C350 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CCDC188H7C350 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC188H7C350 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC188H7C350 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CCDC188H7C350 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CCDC188H7C350 LINC00982-205ENST00000420957 435 ntBASIC17.51■□□□□ 0.39
CCDC188H7C350 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC188H7C350 KRT18P57-201ENST00000443599 1254 ntBASIC17.51■□□□□ 0.39
CCDC188H7C350 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC188H7C350 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC188H7C350 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
CCDC188H7C350 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC188H7C350 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.51■□□□□ 0.39
CCDC188H7C350 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.51■□□□□ 0.39
CCDC188H7C350 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.51■□□□□ 0.39
CCDC188H7C350 AP005901.3-202ENST00000581653 237 ntBASIC17.51■□□□□ 0.39
CCDC188H7C350 SIGLEC16-201ENST00000599858 1437 ntBASIC17.51■□□□□ 0.39
CCDC188H7C350 TERC-201ENST00000602385 541 ntBASIC17.51■□□□□ 0.39
CCDC188H7C350 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CCDC188H7C350 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC188H7C350 AP000867.4-201ENST00000641616 219 ntBASIC17.51■□□□□ 0.39
CCDC188H7C350 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC188H7C350 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC188H7C350 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC188H7C350 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC188H7C350 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC188H7C350 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CCDC188H7C350 AC092384.3-202ENST00000564646 2873 ntBASIC17.51■□□□□ 0.39
CCDC188H7C350 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC188H7C350 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC188H7C350 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC188H7C350 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC188H7C350 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC188H7C350 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
CCDC188H7C350 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC188H7C350 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC188H7C350 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC188H7C350 AC243591.1-201ENST00000452967 1364 ntBASIC17.51■□□□□ 0.39
CCDC188H7C350 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC188H7C350 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC188H7C350 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC188H7C350 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CCDC188H7C350 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC188H7C350 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC188H7C350 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.5■□□□□ 0.39
CCDC188H7C350 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC188H7C350 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC188H7C350 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
CCDC188H7C350 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC188H7C350 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC188H7C350 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC188H7C350 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC188H7C350 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC188H7C350 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC188H7C350 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC188H7C350 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC188H7C350 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC188H7C350 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC188H7C350 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC188H7C350 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC188H7C350 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms