Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC23.93■■□□□ 1.42
CCDC144AA2RUR9 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC23.93■■□□□ 1.42
CCDC144AA2RUR9 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC23.93■■□□□ 1.42
CCDC144AA2RUR9 SPTSSB-204ENST00000617024 1292 ntBASIC23.93■■□□□ 1.42
CCDC144AA2RUR9 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCDC144AA2RUR9 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCDC144AA2RUR9 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCDC144AA2RUR9 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CCDC144AA2RUR9 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCDC144AA2RUR9 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCDC144AA2RUR9 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
CCDC144AA2RUR9 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC23.93■■□□□ 1.42
CCDC144AA2RUR9 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC23.93■■□□□ 1.42
CCDC144AA2RUR9 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC23.93■■□□□ 1.42
CCDC144AA2RUR9 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCDC144AA2RUR9 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCDC144AA2RUR9 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC23.93■■□□□ 1.42
CCDC144AA2RUR9 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCDC144AA2RUR9 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCDC144AA2RUR9 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCDC144AA2RUR9 AC100757.3-201ENST00000622361 1406 ntBASIC23.93■■□□□ 1.42
CCDC144AA2RUR9 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC23.93■■□□□ 1.42
CCDC144AA2RUR9 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CCDC144AA2RUR9 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCDC144AA2RUR9 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC23.93■■□□□ 1.42
CCDC144AA2RUR9 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCDC144AA2RUR9 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CCDC144AA2RUR9 AC236430.1-201ENST00000402231 743 ntBASIC23.93■■□□□ 1.42
CCDC144AA2RUR9 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC23.93■■□□□ 1.42
CCDC144AA2RUR9 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC23.93■■□□□ 1.42
CCDC144AA2RUR9 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC23.93■■□□□ 1.42
CCDC144AA2RUR9 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CCDC144AA2RUR9 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
CCDC144AA2RUR9 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
CCDC144AA2RUR9 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC144AA2RUR9 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC144AA2RUR9 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
CCDC144AA2RUR9 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC144AA2RUR9 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
CCDC144AA2RUR9 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC23.92■■□□□ 1.42
CCDC144AA2RUR9 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC144AA2RUR9 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
CCDC144AA2RUR9 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC144AA2RUR9 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC144AA2RUR9 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC23.92■■□□□ 1.42
CCDC144AA2RUR9 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC144AA2RUR9 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
CCDC144AA2RUR9 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC144AA2RUR9 TSSK5P-201ENST00000423978 907 ntBASIC23.92■■□□□ 1.42
CCDC144AA2RUR9 AC002472.2-201ENST00000442739 958 ntBASIC23.92■■□□□ 1.42
CCDC144AA2RUR9 AC093724.1-201ENST00000448659 1027 ntBASIC23.92■■□□□ 1.42
CCDC144AA2RUR9 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC144AA2RUR9 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC23.92■■□□□ 1.42
CCDC144AA2RUR9 AC004890.2-204ENST00000481968 304 ntBASIC23.92■■□□□ 1.42
CCDC144AA2RUR9 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC23.92■■□□□ 1.42
CCDC144AA2RUR9 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC23.92■■□□□ 1.42
CCDC144AA2RUR9 AC003101.2-201ENST00000612557 442 ntBASIC23.92■■□□□ 1.42
CCDC144AA2RUR9 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC144AA2RUR9 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC144AA2RUR9 GPAA1P2-202ENST00000606848 1787 ntBASIC23.91■■□□□ 1.42
CCDC144AA2RUR9 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
CCDC144AA2RUR9 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC144AA2RUR9 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
CCDC144AA2RUR9 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC23.91■■□□□ 1.42
CCDC144AA2RUR9 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC144AA2RUR9 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC144AA2RUR9 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC23.91■■□□□ 1.42
CCDC144AA2RUR9 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC144AA2RUR9 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC144AA2RUR9 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC144AA2RUR9 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC144AA2RUR9 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC144AA2RUR9 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC23.91■■□□□ 1.42
CCDC144AA2RUR9 RAC2-204ENST00000406508 893 ntTSL 5 BASIC23.91■■□□□ 1.42
CCDC144AA2RUR9 AL353705.2-201ENST00000428243 662 ntBASIC23.91■■□□□ 1.42
CCDC144AA2RUR9 AC241585.1-201ENST00000433527 519 ntBASIC23.91■■□□□ 1.42
CCDC144AA2RUR9 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC23.91■■□□□ 1.42
CCDC144AA2RUR9 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC23.91■■□□□ 1.42
CCDC144AA2RUR9 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC144AA2RUR9 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC23.91■■□□□ 1.42
CCDC144AA2RUR9 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC23.91■■□□□ 1.42
CCDC144AA2RUR9 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC23.91■■□□□ 1.42
CCDC144AA2RUR9 FHL2-212ENST00000607522 759 ntTSL 2 BASIC23.91■■□□□ 1.42
CCDC144AA2RUR9 AL138828.2-201ENST00000615812 383 ntBASIC23.91■■□□□ 1.42
CCDC144AA2RUR9 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
CCDC144AA2RUR9 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
CCDC144AA2RUR9 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC144AA2RUR9 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC23.9■■□□□ 1.42
CCDC144AA2RUR9 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCDC144AA2RUR9 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC23.9■■□□□ 1.42
CCDC144AA2RUR9 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCDC144AA2RUR9 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
CCDC144AA2RUR9 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC23.9■■□□□ 1.42
CCDC144AA2RUR9 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCDC144AA2RUR9 AL603756.1-201ENST00000606511 2163 ntBASIC23.9■■□□□ 1.42
CCDC144AA2RUR9 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCDC144AA2RUR9 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCDC144AA2RUR9 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCDC144AA2RUR9 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCDC144AA2RUR9 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms