Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC196A0A1B0GTZ2 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC196A0A1B0GTZ2 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC196A0A1B0GTZ2 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC196A0A1B0GTZ2 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CCDC196A0A1B0GTZ2 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC196A0A1B0GTZ2 KRT8P39-201ENST00000396270 1433 ntBASIC19.55■□□□□ 0.72
CCDC196A0A1B0GTZ2 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC196A0A1B0GTZ2 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
CCDC196A0A1B0GTZ2 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC196A0A1B0GTZ2 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC196A0A1B0GTZ2 AL591424.1-201ENST00000442569 1213 ntBASIC19.55■□□□□ 0.72
CCDC196A0A1B0GTZ2 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.55■□□□□ 0.72
CCDC196A0A1B0GTZ2 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC196A0A1B0GTZ2 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC196A0A1B0GTZ2 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC196A0A1B0GTZ2 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CCDC196A0A1B0GTZ2 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC196A0A1B0GTZ2 AC064836.3-201ENST00000607928 673 ntBASIC19.55■□□□□ 0.72
CCDC196A0A1B0GTZ2 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC196A0A1B0GTZ2 AC007064.4-201ENST00000637740 555 ntBASIC19.55■□□□□ 0.72
CCDC196A0A1B0GTZ2 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CCDC196A0A1B0GTZ2 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC196A0A1B0GTZ2 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC196A0A1B0GTZ2 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CCDC196A0A1B0GTZ2 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
CCDC196A0A1B0GTZ2 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC196A0A1B0GTZ2 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC196A0A1B0GTZ2 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC196A0A1B0GTZ2 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
CCDC196A0A1B0GTZ2 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC196A0A1B0GTZ2 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC196A0A1B0GTZ2 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC196A0A1B0GTZ2 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC196A0A1B0GTZ2 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC196A0A1B0GTZ2 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC196A0A1B0GTZ2 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC196A0A1B0GTZ2 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC196A0A1B0GTZ2 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC196A0A1B0GTZ2 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.54■□□□□ 0.72
CCDC196A0A1B0GTZ2 HLA-A-202ENST00000376806 1854 ntBASIC19.54■□□□□ 0.72
CCDC196A0A1B0GTZ2 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.54■□□□□ 0.72
CCDC196A0A1B0GTZ2 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC196A0A1B0GTZ2 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
CCDC196A0A1B0GTZ2 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CCDC196A0A1B0GTZ2 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC196A0A1B0GTZ2 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC196A0A1B0GTZ2 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC196A0A1B0GTZ2 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC196A0A1B0GTZ2 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC196A0A1B0GTZ2 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.54■□□□□ 0.72
CCDC196A0A1B0GTZ2 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC196A0A1B0GTZ2 SLC25A1P1-201ENST00000528351 927 ntBASIC19.54■□□□□ 0.72
CCDC196A0A1B0GTZ2 AL031432.2-201ENST00000566714 459 ntBASIC19.54■□□□□ 0.72
CCDC196A0A1B0GTZ2 AL928711.1-201ENST00000570165 459 ntBASIC19.54■□□□□ 0.72
CCDC196A0A1B0GTZ2 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC196A0A1B0GTZ2 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC196A0A1B0GTZ2 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.54■□□□□ 0.72
CCDC196A0A1B0GTZ2 AC010507.1-201ENST00000633895 436 ntBASIC19.54■□□□□ 0.72
CCDC196A0A1B0GTZ2 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC196A0A1B0GTZ2 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC196A0A1B0GTZ2 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.54■□□□□ 0.72
CCDC196A0A1B0GTZ2 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC196A0A1B0GTZ2 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC196A0A1B0GTZ2 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC196A0A1B0GTZ2 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC196A0A1B0GTZ2 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC196A0A1B0GTZ2 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC196A0A1B0GTZ2 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC196A0A1B0GTZ2 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC196A0A1B0GTZ2 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC196A0A1B0GTZ2 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CCDC196A0A1B0GTZ2 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC196A0A1B0GTZ2 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC196A0A1B0GTZ2 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC196A0A1B0GTZ2 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC196A0A1B0GTZ2 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC196A0A1B0GTZ2 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC196A0A1B0GTZ2 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC196A0A1B0GTZ2 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC196A0A1B0GTZ2 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC196A0A1B0GTZ2 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC196A0A1B0GTZ2 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC196A0A1B0GTZ2 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC196A0A1B0GTZ2 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC196A0A1B0GTZ2 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC196A0A1B0GTZ2 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC196A0A1B0GTZ2 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC196A0A1B0GTZ2 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.53■□□□□ 0.72
CCDC196A0A1B0GTZ2 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC196A0A1B0GTZ2 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CCDC196A0A1B0GTZ2 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC196A0A1B0GTZ2 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC196A0A1B0GTZ2 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC196A0A1B0GTZ2 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.53■□□□□ 0.72
CCDC196A0A1B0GTZ2 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC196A0A1B0GTZ2 AC023141.13-201ENST00000604991 943 ntBASIC19.53■□□□□ 0.72
CCDC196A0A1B0GTZ2 AC027601.4-201ENST00000611259 610 ntBASIC19.53■□□□□ 0.72
CCDC196A0A1B0GTZ2 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.53■□□□□ 0.72
CCDC196A0A1B0GTZ2 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms