Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 SLC25A1P3-201ENST00000395415 828 ntBASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 HSPA7-201ENST00000445535 1927 ntBASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 SERP1-208ENST00000491660 830 ntTSL 2 BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 KRT8P3-201ENST00000519669 1449 ntBASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 SLC7A5P2-201ENST00000553010 536 ntBASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC8.67□□□□□ -1.02
LINC01558Q9Y6Z2 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 AC132938.6-201ENST00000623828 1655 ntBASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 AC002310.6-201ENST00000624451 1377 ntBASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 AC010141.2-201ENST00000452426 721 ntBASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 GXYLT1P5-201ENST00000614548 1189 ntBASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 AP003680.1-201ENST00000598970 3660 ntBASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
LINC01558Q9Y6Z2 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC8.66□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms