Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
CDC42BPBQ9Y5S2 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
CDC42BPBQ9Y5S2 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
CDC42BPBQ9Y5S2 AL390961.4-201ENST00000623958 2535 ntBASIC25.01■■□□□ 1.59
CDC42BPBQ9Y5S2 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
CDC42BPBQ9Y5S2 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC25■■□□□ 1.59
CDC42BPBQ9Y5S2 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC25■■□□□ 1.59
CDC42BPBQ9Y5S2 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
CDC42BPBQ9Y5S2 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
CDC42BPBQ9Y5S2 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
CDC42BPBQ9Y5S2 AC087499.6-201ENST00000411576 835 ntBASIC25■■□□□ 1.59
CDC42BPBQ9Y5S2 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC25■■□□□ 1.59
CDC42BPBQ9Y5S2 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC25■■□□□ 1.59
CDC42BPBQ9Y5S2 FUZ-207ENST00000526575 482 ntTSL 4 BASIC25■■□□□ 1.59
CDC42BPBQ9Y5S2 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC25■■□□□ 1.59
CDC42BPBQ9Y5S2 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC25■■□□□ 1.59
CDC42BPBQ9Y5S2 AL139011.1-202ENST00000642063 584 ntBASIC25■■□□□ 1.59
CDC42BPBQ9Y5S2 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC25■■□□□ 1.59
CDC42BPBQ9Y5S2 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC25■■□□□ 1.59
CDC42BPBQ9Y5S2 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC25■■□□□ 1.59
CDC42BPBQ9Y5S2 PCDHB17P-201ENST00000539533 2393 ntBASIC25■■□□□ 1.59
CDC42BPBQ9Y5S2 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC25■■□□□ 1.59
CDC42BPBQ9Y5S2 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC25■■□□□ 1.59
CDC42BPBQ9Y5S2 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC25■■□□□ 1.59
CDC42BPBQ9Y5S2 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CDC42BPBQ9Y5S2 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC25■■□□□ 1.59
CDC42BPBQ9Y5S2 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC25■■□□□ 1.59
CDC42BPBQ9Y5S2 RAD18-204ENST00000418463 563 ntTSL 4 BASIC25■■□□□ 1.59
CDC42BPBQ9Y5S2 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC25■■□□□ 1.59
CDC42BPBQ9Y5S2 RAD18-205ENST00000421052 582 ntTSL 3 BASIC25■■□□□ 1.59
CDC42BPBQ9Y5S2 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC25■■□□□ 1.59
CDC42BPBQ9Y5S2 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC25■■□□□ 1.59
CDC42BPBQ9Y5S2 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC25■■□□□ 1.59
CDC42BPBQ9Y5S2 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC25■■□□□ 1.59
CDC42BPBQ9Y5S2 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
CDC42BPBQ9Y5S2 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
CDC42BPBQ9Y5S2 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CDC42BPBQ9Y5S2 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CDC42BPBQ9Y5S2 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC24.99■■□□□ 1.59
CDC42BPBQ9Y5S2 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC24.99■■□□□ 1.59
CDC42BPBQ9Y5S2 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CDC42BPBQ9Y5S2 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CDC42BPBQ9Y5S2 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CDC42BPBQ9Y5S2 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC24.99■■□□□ 1.59
CDC42BPBQ9Y5S2 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC24.99■■□□□ 1.59
CDC42BPBQ9Y5S2 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC24.99■■□□□ 1.59
CDC42BPBQ9Y5S2 NAA38-206ENST00000576384 424 ntTSL 2 BASIC24.99■■□□□ 1.59
CDC42BPBQ9Y5S2 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC24.99■■□□□ 1.59
CDC42BPBQ9Y5S2 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CDC42BPBQ9Y5S2 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CDC42BPBQ9Y5S2 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CDC42BPBQ9Y5S2 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CDC42BPBQ9Y5S2 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC24.98■■□□□ 1.59
CDC42BPBQ9Y5S2 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CDC42BPBQ9Y5S2 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
CDC42BPBQ9Y5S2 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CDC42BPBQ9Y5S2 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CDC42BPBQ9Y5S2 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC24.98■■□□□ 1.59
CDC42BPBQ9Y5S2 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC24.98■■□□□ 1.59
CDC42BPBQ9Y5S2 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC24.98■■□□□ 1.59
CDC42BPBQ9Y5S2 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CDC42BPBQ9Y5S2 AC123567.1-201ENST00000548294 1261 ntBASIC24.98■■□□□ 1.59
CDC42BPBQ9Y5S2 MIR4259-201ENST00000584466 101 ntBASIC24.98■■□□□ 1.59
CDC42BPBQ9Y5S2 WFDC1-204ENST00000613603 549 ntBASIC24.98■■□□□ 1.59
CDC42BPBQ9Y5S2 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
CDC42BPBQ9Y5S2 AC092068.3-201ENST00000587894 2016 ntBASIC24.98■■□□□ 1.59
CDC42BPBQ9Y5S2 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC24.98■■□□□ 1.59
CDC42BPBQ9Y5S2 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC24.98■■□□□ 1.59
CDC42BPBQ9Y5S2 AL589702.1-201ENST00000641229 1509 ntBASIC24.98■■□□□ 1.59
CDC42BPBQ9Y5S2 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC24.98■■□□□ 1.59
CDC42BPBQ9Y5S2 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CDC42BPBQ9Y5S2 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CDC42BPBQ9Y5S2 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
CDC42BPBQ9Y5S2 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
CDC42BPBQ9Y5S2 RN7SL752P-201ENST00000463779 287 ntBASIC24.98■■□□□ 1.59
CDC42BPBQ9Y5S2 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CDC42BPBQ9Y5S2 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC24.98■■□□□ 1.59
CDC42BPBQ9Y5S2 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC24.98■■□□□ 1.59
CDC42BPBQ9Y5S2 RAB43P1-201ENST00000561790 589 ntBASIC24.98■■□□□ 1.59
CDC42BPBQ9Y5S2 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CDC42BPBQ9Y5S2 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
CDC42BPBQ9Y5S2 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
CDC42BPBQ9Y5S2 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CDC42BPBQ9Y5S2 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CDC42BPBQ9Y5S2 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC24.97■■□□□ 1.59
CDC42BPBQ9Y5S2 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
CDC42BPBQ9Y5S2 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC24.97■■□□□ 1.59
CDC42BPBQ9Y5S2 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC24.97■■□□□ 1.59
CDC42BPBQ9Y5S2 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CDC42BPBQ9Y5S2 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC24.97■■□□□ 1.59
CDC42BPBQ9Y5S2 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC24.97■■□□□ 1.59
CDC42BPBQ9Y5S2 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
CDC42BPBQ9Y5S2 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
CDC42BPBQ9Y5S2 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CDC42BPBQ9Y5S2 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
CDC42BPBQ9Y5S2 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CDC42BPBQ9Y5S2 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
CDC42BPBQ9Y5S2 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CDC42BPBQ9Y5S2 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CDC42BPBQ9Y5S2 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms