Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.44■□□□□ 0.22
PCDHGA3Q9Y5H0 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.44■□□□□ 0.22
PCDHGA3Q9Y5H0 AL031432.2-201ENST00000566714 459 ntBASIC16.44■□□□□ 0.22
PCDHGA3Q9Y5H0 AL928711.1-201ENST00000570165 459 ntBASIC16.44■□□□□ 0.22
PCDHGA3Q9Y5H0 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHGA3Q9Y5H0 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.44■□□□□ 0.22
PCDHGA3Q9Y5H0 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.44■□□□□ 0.22
PCDHGA3Q9Y5H0 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA3Q9Y5H0 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.44■□□□□ 0.22
PCDHGA3Q9Y5H0 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA3Q9Y5H0 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.44■□□□□ 0.22
PCDHGA3Q9Y5H0 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA3Q9Y5H0 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA3Q9Y5H0 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.44■□□□□ 0.22
PCDHGA3Q9Y5H0 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA3Q9Y5H0 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.44■□□□□ 0.22
PCDHGA3Q9Y5H0 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA3Q9Y5H0 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA3Q9Y5H0 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA3Q9Y5H0 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA3Q9Y5H0 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.44■□□□□ 0.22
PCDHGA3Q9Y5H0 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA3Q9Y5H0 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PCDHGA3Q9Y5H0 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA3Q9Y5H0 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
PCDHGA3Q9Y5H0 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PCDHGA3Q9Y5H0 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA3Q9Y5H0 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHGA3Q9Y5H0 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA3Q9Y5H0 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA3Q9Y5H0 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHGA3Q9Y5H0 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA3Q9Y5H0 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA3Q9Y5H0 AL645939.2-201ENST00000427340 991 ntBASIC16.43■□□□□ 0.22
PCDHGA3Q9Y5H0 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
PCDHGA3Q9Y5H0 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.43■□□□□ 0.22
PCDHGA3Q9Y5H0 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHGA3Q9Y5H0 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA3Q9Y5H0 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.43■□□□□ 0.22
PCDHGA3Q9Y5H0 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.43■□□□□ 0.22
PCDHGA3Q9Y5H0 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHGA3Q9Y5H0 LINC02084-201ENST00000606069 1096 ntBASIC16.43■□□□□ 0.22
PCDHGA3Q9Y5H0 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA3Q9Y5H0 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA3Q9Y5H0 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA3Q9Y5H0 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA3Q9Y5H0 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PCDHGA3Q9Y5H0 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA3Q9Y5H0 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA3Q9Y5H0 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHGA3Q9Y5H0 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA3Q9Y5H0 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHGA3Q9Y5H0 AC025580.3-201ENST00000617932 1424 ntBASIC16.43■□□□□ 0.22
PCDHGA3Q9Y5H0 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA3Q9Y5H0 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA3Q9Y5H0 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHGA3Q9Y5H0 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA3Q9Y5H0 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PCDHGA3Q9Y5H0 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA3Q9Y5H0 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA3Q9Y5H0 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA3Q9Y5H0 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA3Q9Y5H0 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA3Q9Y5H0 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA3Q9Y5H0 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PCDHGA3Q9Y5H0 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA3Q9Y5H0 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA3Q9Y5H0 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA3Q9Y5H0 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA3Q9Y5H0 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PCDHGA3Q9Y5H0 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA3Q9Y5H0 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA3Q9Y5H0 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PCDHGA3Q9Y5H0 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA3Q9Y5H0 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA3Q9Y5H0 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHGA3Q9Y5H0 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA3Q9Y5H0 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA3Q9Y5H0 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDHGA3Q9Y5H0 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA3Q9Y5H0 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.42■□□□□ 0.22
PCDHGA3Q9Y5H0 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.42■□□□□ 0.22
PCDHGA3Q9Y5H0 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.42■□□□□ 0.22
PCDHGA3Q9Y5H0 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
PCDHGA3Q9Y5H0 AP000344.2-201ENST00000512987 629 ntBASIC16.42■□□□□ 0.22
PCDHGA3Q9Y5H0 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDHGA3Q9Y5H0 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDHGA3Q9Y5H0 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHGA3Q9Y5H0 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA3Q9Y5H0 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA3Q9Y5H0 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PCDHGA3Q9Y5H0 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHGA3Q9Y5H0 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHGA3Q9Y5H0 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA3Q9Y5H0 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA3Q9Y5H0 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA3Q9Y5H0 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
PCDHGA3Q9Y5H0 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PCDHGA3Q9Y5H0 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA3Q9Y5H0 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms