Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHA4Q9UN74 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHA4Q9UN74 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PCDHA4Q9UN74 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHA4Q9UN74 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDHA4Q9UN74 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHA4Q9UN74 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PCDHA4Q9UN74 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHA4Q9UN74 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
PCDHA4Q9UN74 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHA4Q9UN74 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PCDHA4Q9UN74 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHA4Q9UN74 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHA4Q9UN74 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHA4Q9UN74 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHA4Q9UN74 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHA4Q9UN74 RNU1-129P-201ENST00000384064 167 ntBASIC19.19■□□□□ 0.66
PCDHA4Q9UN74 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHA4Q9UN74 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHA4Q9UN74 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHA4Q9UN74 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHA4Q9UN74 U1.21-201ENST00000580816 167 ntBASIC19.19■□□□□ 0.66
PCDHA4Q9UN74 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHA4Q9UN74 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHA4Q9UN74 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
PCDHA4Q9UN74 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHA4Q9UN74 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHA4Q9UN74 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHA4Q9UN74 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHA4Q9UN74 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHA4Q9UN74 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.19■□□□□ 0.66
PCDHA4Q9UN74 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHA4Q9UN74 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHA4Q9UN74 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHA4Q9UN74 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHA4Q9UN74 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHA4Q9UN74 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHA4Q9UN74 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHA4Q9UN74 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHA4Q9UN74 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHA4Q9UN74 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHA4Q9UN74 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHA4Q9UN74 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.18■□□□□ 0.66
PCDHA4Q9UN74 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHA4Q9UN74 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PCDHA4Q9UN74 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHA4Q9UN74 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHA4Q9UN74 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHA4Q9UN74 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHA4Q9UN74 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHA4Q9UN74 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHA4Q9UN74 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.18■□□□□ 0.66
PCDHA4Q9UN74 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHA4Q9UN74 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.18■□□□□ 0.66
PCDHA4Q9UN74 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHA4Q9UN74 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.18■□□□□ 0.66
PCDHA4Q9UN74 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.18■□□□□ 0.66
PCDHA4Q9UN74 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.18■□□□□ 0.66
PCDHA4Q9UN74 AC040169.1-201ENST00000565382 521 ntBASIC19.18■□□□□ 0.66
PCDHA4Q9UN74 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHA4Q9UN74 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHA4Q9UN74 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHA4Q9UN74 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHA4Q9UN74 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHA4Q9UN74 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHA4Q9UN74 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHA4Q9UN74 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHA4Q9UN74 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHA4Q9UN74 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHA4Q9UN74 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHA4Q9UN74 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHA4Q9UN74 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHA4Q9UN74 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHA4Q9UN74 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PCDHA4Q9UN74 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDHA4Q9UN74 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHA4Q9UN74 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHA4Q9UN74 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHA4Q9UN74 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHA4Q9UN74 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHA4Q9UN74 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PCDHA4Q9UN74 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHA4Q9UN74 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHA4Q9UN74 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDHA4Q9UN74 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHA4Q9UN74 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHA4Q9UN74 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDHA4Q9UN74 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHA4Q9UN74 AC023274.1-201ENST00000418278 595 ntBASIC19.17■□□□□ 0.66
PCDHA4Q9UN74 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHA4Q9UN74 AC074386.1-202ENST00000463561 864 ntBASIC19.17■□□□□ 0.66
PCDHA4Q9UN74 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHA4Q9UN74 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.17■□□□□ 0.66
PCDHA4Q9UN74 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.17■□□□□ 0.66
PCDHA4Q9UN74 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.17■□□□□ 0.66
PCDHA4Q9UN74 AL031055.1-201ENST00000606362 631 ntBASIC19.17■□□□□ 0.66
PCDHA4Q9UN74 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHA4Q9UN74 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHA4Q9UN74 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHA4Q9UN74 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms