Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGC3Q9UN70 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PCDHGC3Q9UN70 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PCDHGC3Q9UN70 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHGC3Q9UN70 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGC3Q9UN70 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PCDHGC3Q9UN70 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGC3Q9UN70 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PCDHGC3Q9UN70 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGC3Q9UN70 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGC3Q9UN70 ZNF259P1-201ENST00000407656 1365 ntBASIC17.72■□□□□ 0.43
PCDHGC3Q9UN70 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGC3Q9UN70 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGC3Q9UN70 AC017007.3-201ENST00000479865 435 ntBASIC17.72■□□□□ 0.43
PCDHGC3Q9UN70 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGC3Q9UN70 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
PCDHGC3Q9UN70 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.72■□□□□ 0.43
PCDHGC3Q9UN70 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.72■□□□□ 0.43
PCDHGC3Q9UN70 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PCDHGC3Q9UN70 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHGC3Q9UN70 MIR3909-201ENST00000579518 119 ntBASIC17.72■□□□□ 0.43
PCDHGC3Q9UN70 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGC3Q9UN70 AC120114.3-201ENST00000611923 658 ntBASIC17.72■□□□□ 0.43
PCDHGC3Q9UN70 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHGC3Q9UN70 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
PCDHGC3Q9UN70 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGC3Q9UN70 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGC3Q9UN70 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGC3Q9UN70 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGC3Q9UN70 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGC3Q9UN70 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHGC3Q9UN70 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGC3Q9UN70 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGC3Q9UN70 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PCDHGC3Q9UN70 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGC3Q9UN70 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHGC3Q9UN70 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGC3Q9UN70 RNU1-129P-201ENST00000384064 167 ntBASIC17.71■□□□□ 0.43
PCDHGC3Q9UN70 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
PCDHGC3Q9UN70 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHGC3Q9UN70 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHGC3Q9UN70 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHGC3Q9UN70 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGC3Q9UN70 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGC3Q9UN70 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.71■□□□□ 0.43
PCDHGC3Q9UN70 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.71■□□□□ 0.43
PCDHGC3Q9UN70 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.71■□□□□ 0.43
PCDHGC3Q9UN70 U1.21-201ENST00000580816 167 ntBASIC17.71■□□□□ 0.43
PCDHGC3Q9UN70 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.71■□□□□ 0.43
PCDHGC3Q9UN70 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGC3Q9UN70 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.71■□□□□ 0.43
PCDHGC3Q9UN70 AC007064.4-201ENST00000637740 555 ntBASIC17.71■□□□□ 0.43
PCDHGC3Q9UN70 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGC3Q9UN70 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHGC3Q9UN70 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHGC3Q9UN70 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGC3Q9UN70 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.71■□□□□ 0.43
PCDHGC3Q9UN70 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGC3Q9UN70 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
PCDHGC3Q9UN70 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGC3Q9UN70 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGC3Q9UN70 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PCDHGC3Q9UN70 AC124067.4-201ENST00000519691 2379 ntBASIC17.71■□□□□ 0.42
PCDHGC3Q9UN70 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGC3Q9UN70 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHGC3Q9UN70 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PCDHGC3Q9UN70 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGC3Q9UN70 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
PCDHGC3Q9UN70 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGC3Q9UN70 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PCDHGC3Q9UN70 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHGC3Q9UN70 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHGC3Q9UN70 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PCDHGC3Q9UN70 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGC3Q9UN70 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.7■□□□□ 0.42
PCDHGC3Q9UN70 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGC3Q9UN70 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHGC3Q9UN70 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.7■□□□□ 0.42
PCDHGC3Q9UN70 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PCDHGC3Q9UN70 KRT18P2-201ENST00000447938 1258 ntBASIC17.7■□□□□ 0.42
PCDHGC3Q9UN70 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHGC3Q9UN70 AC023141.13-201ENST00000604991 943 ntBASIC17.7■□□□□ 0.42
PCDHGC3Q9UN70 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGC3Q9UN70 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHGC3Q9UN70 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGC3Q9UN70 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGC3Q9UN70 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGC3Q9UN70 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGC3Q9UN70 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGC3Q9UN70 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGC3Q9UN70 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
PCDHGC3Q9UN70 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHGC3Q9UN70 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHGC3Q9UN70 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGC3Q9UN70 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PCDHGC3Q9UN70 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHGC3Q9UN70 ME2P1-201ENST00000426028 1970 ntBASIC17.7■□□□□ 0.42
PCDHGC3Q9UN70 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGC3Q9UN70 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDHGC3Q9UN70 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms