Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 AC141586.5-201ENST00000624546 2050 ntBASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 AC016027.1-202ENST00000607927 1699 ntBASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 AC026150.2-201ENST00000564693 1156 ntBASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 AC027307.2-201ENST00000591252 911 ntBASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 AC084121.4-201ENST00000641598 221 ntBASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 AF228730.8-201ENST00000642140 221 ntBASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 AC139713.2-201ENST00000641328 2723 ntBASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 LINC02012-201ENST00000608206 1725 ntBASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.22■□□□□ 0.19
LRIT1Q9P2V4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 SLC25A39P2-201ENST00000537614 270 ntBASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 AC051619.7-201ENST00000568314 623 ntBASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 MIR4492-201ENST00000581627 80 ntBASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.21■□□□□ 0.19
LRIT1Q9P2V4 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
LRIT1Q9P2V4 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms