Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.44■□□□□ 0.06
LRFN1Q9P244 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
LRFN1Q9P244 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.44■□□□□ 0.06
LRFN1Q9P244 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.44■□□□□ 0.06
LRFN1Q9P244 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.44■□□□□ 0.06
LRFN1Q9P244 AC004449.1-201ENST00000564240 433 ntBASIC15.44■□□□□ 0.06
LRFN1Q9P244 RARRES2P8-201ENST00000566335 367 ntBASIC15.44■□□□□ 0.06
LRFN1Q9P244 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.44■□□□□ 0.06
LRFN1Q9P244 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRFN1Q9P244 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
LRFN1Q9P244 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.44■□□□□ 0.06
LRFN1Q9P244 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRFN1Q9P244 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LRFN1Q9P244 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRFN1Q9P244 SLC22A20-204ENST00000530038 1673 ntBASIC15.44■□□□□ 0.06
LRFN1Q9P244 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LRFN1Q9P244 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRFN1Q9P244 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
LRFN1Q9P244 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRFN1Q9P244 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRFN1Q9P244 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRFN1Q9P244 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
LRFN1Q9P244 LINC02012-201ENST00000608206 1725 ntBASIC15.43■□□□□ 0.06
LRFN1Q9P244 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRFN1Q9P244 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
LRFN1Q9P244 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.43■□□□□ 0.06
LRFN1Q9P244 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRFN1Q9P244 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LRFN1Q9P244 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
LRFN1Q9P244 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.43■□□□□ 0.06
LRFN1Q9P244 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.43■□□□□ 0.06
LRFN1Q9P244 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRFN1Q9P244 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRFN1Q9P244 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRFN1Q9P244 AC023141.5-201ENST00000458585 616 ntBASIC15.43■□□□□ 0.06
LRFN1Q9P244 KRT8P48-201ENST00000515599 1220 ntBASIC15.43■□□□□ 0.06
LRFN1Q9P244 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.43■□□□□ 0.06
LRFN1Q9P244 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.43■□□□□ 0.06
LRFN1Q9P244 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.43■□□□□ 0.06
LRFN1Q9P244 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
LRFN1Q9P244 MPDU1-223ENST00000582151 728 ntBASIC15.43■□□□□ 0.06
LRFN1Q9P244 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.43■□□□□ 0.06
LRFN1Q9P244 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRFN1Q9P244 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.43■□□□□ 0.06
LRFN1Q9P244 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.43■□□□□ 0.06
LRFN1Q9P244 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.43■□□□□ 0.06
LRFN1Q9P244 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.43■□□□□ 0.06
LRFN1Q9P244 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
LRFN1Q9P244 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LRFN1Q9P244 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRFN1Q9P244 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRFN1Q9P244 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
LRFN1Q9P244 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.43■□□□□ 0.06
LRFN1Q9P244 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.43■□□□□ 0.06
LRFN1Q9P244 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRFN1Q9P244 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRFN1Q9P244 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.43■□□□□ 0.06
LRFN1Q9P244 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
LRFN1Q9P244 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRFN1Q9P244 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRFN1Q9P244 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRFN1Q9P244 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.42■□□□□ 0.06
LRFN1Q9P244 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LRFN1Q9P244 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LRFN1Q9P244 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRFN1Q9P244 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRFN1Q9P244 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.42■□□□□ 0.06
LRFN1Q9P244 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.42■□□□□ 0.06
LRFN1Q9P244 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LRFN1Q9P244 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
LRFN1Q9P244 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRFN1Q9P244 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LRFN1Q9P244 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.42■□□□□ 0.06
LRFN1Q9P244 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.42■□□□□ 0.06
LRFN1Q9P244 AC005237.2-201ENST00000434368 219 ntBASIC15.42■□□□□ 0.06
LRFN1Q9P244 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.42■□□□□ 0.06
LRFN1Q9P244 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.42■□□□□ 0.06
LRFN1Q9P244 RFPL4AP1-201ENST00000530883 850 ntBASIC15.42■□□□□ 0.06
LRFN1Q9P244 AC109635.5-201ENST00000533593 962 ntBASIC15.42■□□□□ 0.06
LRFN1Q9P244 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
LRFN1Q9P244 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.42■□□□□ 0.06
LRFN1Q9P244 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.42■□□□□ 0.06
LRFN1Q9P244 DUX4L17-201ENST00000557360 1267 ntBASIC15.42■□□□□ 0.06
LRFN1Q9P244 AL135744.1-201ENST00000565098 629 ntBASIC15.42■□□□□ 0.06
LRFN1Q9P244 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRFN1Q9P244 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRFN1Q9P244 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.42■□□□□ 0.06
LRFN1Q9P244 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.42■□□□□ 0.06
LRFN1Q9P244 LINC02084-201ENST00000606069 1096 ntBASIC15.42■□□□□ 0.06
LRFN1Q9P244 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRFN1Q9P244 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.42■□□□□ 0.06
LRFN1Q9P244 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.42■□□□□ 0.06
LRFN1Q9P244 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
LRFN1Q9P244 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LRFN1Q9P244 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRFN1Q9P244 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.42■□□□□ 0.06
LRFN1Q9P244 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.42■□□□□ 0.06
LRFN1Q9P244 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.42■□□□□ 0.06
LRFN1Q9P244 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
LRFN1Q9P244 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms