Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 AC002056.1-201ENST00000395613 760 ntBASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 AC112191.1-201ENST00000523689 701 ntBASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 AC021097.1-201ENST00000607902 574 ntBASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 C20orf181-201ENST00000623918 480 ntBASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 FLJ38576-201ENST00000623820 2459 ntBASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM248Q9NWD8 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.34
TMEM248Q9NWD8 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
TMEM248Q9NWD8 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEM248Q9NWD8 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEM248Q9NWD8 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TMEM248Q9NWD8 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.14■□□□□ 0.33
TMEM248Q9NWD8 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM248Q9NWD8 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.14■□□□□ 0.33
TMEM248Q9NWD8 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM248Q9NWD8 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.14■□□□□ 0.33
TMEM248Q9NWD8 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM248Q9NWD8 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEM248Q9NWD8 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM248Q9NWD8 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TMEM248Q9NWD8 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TMEM248Q9NWD8 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TMEM248Q9NWD8 AC092474.2-201ENST00000424288 719 ntBASIC17.14■□□□□ 0.33
TMEM248Q9NWD8 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEM248Q9NWD8 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.14■□□□□ 0.33
TMEM248Q9NWD8 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.14■□□□□ 0.33
TMEM248Q9NWD8 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEM248Q9NWD8 AC091812.2-201ENST00000619081 385 ntBASIC17.14■□□□□ 0.33
TMEM248Q9NWD8 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM248Q9NWD8 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM248Q9NWD8 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM248Q9NWD8 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM248Q9NWD8 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM248Q9NWD8 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM248Q9NWD8 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM248Q9NWD8 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM248Q9NWD8 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEM248Q9NWD8 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.13■□□□□ 0.33
TMEM248Q9NWD8 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM248Q9NWD8 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.13■□□□□ 0.33
TMEM248Q9NWD8 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.13■□□□□ 0.33
TMEM248Q9NWD8 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.13■□□□□ 0.33
TMEM248Q9NWD8 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM248Q9NWD8 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.13■□□□□ 0.33
TMEM248Q9NWD8 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM248Q9NWD8 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.13■□□□□ 0.33
TMEM248Q9NWD8 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.13■□□□□ 0.33
TMEM248Q9NWD8 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM248Q9NWD8 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TMEM248Q9NWD8 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM248Q9NWD8 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM248Q9NWD8 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM248Q9NWD8 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.13■□□□□ 0.33
TMEM248Q9NWD8 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TMEM248Q9NWD8 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM248Q9NWD8 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.13■□□□□ 0.33
TMEM248Q9NWD8 FAM58CP-201ENST00000435741 640 ntBASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms