Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.67■□□□□ 0.58
BLOC1S4Q9NUP1 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.67■□□□□ 0.58
BLOC1S4Q9NUP1 AP001350.2-201ENST00000625104 1094 ntBASIC18.67■□□□□ 0.58
BLOC1S4Q9NUP1 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BLOC1S4Q9NUP1 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
BLOC1S4Q9NUP1 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.67■□□□□ 0.58
BLOC1S4Q9NUP1 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
BLOC1S4Q9NUP1 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.67■□□□□ 0.58
BLOC1S4Q9NUP1 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BLOC1S4Q9NUP1 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BLOC1S4Q9NUP1 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.67■□□□□ 0.58
BLOC1S4Q9NUP1 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
BLOC1S4Q9NUP1 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
BLOC1S4Q9NUP1 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BLOC1S4Q9NUP1 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
BLOC1S4Q9NUP1 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.66■□□□□ 0.58
BLOC1S4Q9NUP1 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
BLOC1S4Q9NUP1 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.66■□□□□ 0.58
BLOC1S4Q9NUP1 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BLOC1S4Q9NUP1 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BLOC1S4Q9NUP1 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BLOC1S4Q9NUP1 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.66■□□□□ 0.58
BLOC1S4Q9NUP1 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
BLOC1S4Q9NUP1 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.66■□□□□ 0.58
BLOC1S4Q9NUP1 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
BLOC1S4Q9NUP1 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BLOC1S4Q9NUP1 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
BLOC1S4Q9NUP1 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.66■□□□□ 0.58
BLOC1S4Q9NUP1 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
BLOC1S4Q9NUP1 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BLOC1S4Q9NUP1 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.66■□□□□ 0.58
BLOC1S4Q9NUP1 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.66■□□□□ 0.58
BLOC1S4Q9NUP1 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.66■□□□□ 0.58
BLOC1S4Q9NUP1 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.66■□□□□ 0.58
BLOC1S4Q9NUP1 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BLOC1S4Q9NUP1 AC140113.2-201ENST00000604370 208 ntBASIC18.66■□□□□ 0.58
BLOC1S4Q9NUP1 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
BLOC1S4Q9NUP1 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.66■□□□□ 0.58
BLOC1S4Q9NUP1 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.66■□□□□ 0.58
BLOC1S4Q9NUP1 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BLOC1S4Q9NUP1 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.66■□□□□ 0.58
BLOC1S4Q9NUP1 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
BLOC1S4Q9NUP1 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
BLOC1S4Q9NUP1 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.66■□□□□ 0.58
BLOC1S4Q9NUP1 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
BLOC1S4Q9NUP1 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
BLOC1S4Q9NUP1 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.66■□□□□ 0.58
BLOC1S4Q9NUP1 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BLOC1S4Q9NUP1 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BLOC1S4Q9NUP1 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BLOC1S4Q9NUP1 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
BLOC1S4Q9NUP1 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
BLOC1S4Q9NUP1 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.65■□□□□ 0.58
BLOC1S4Q9NUP1 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
BLOC1S4Q9NUP1 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BLOC1S4Q9NUP1 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
BLOC1S4Q9NUP1 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
BLOC1S4Q9NUP1 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.65■□□□□ 0.58
BLOC1S4Q9NUP1 RNU1-129P-201ENST00000384064 167 ntBASIC18.65■□□□□ 0.58
BLOC1S4Q9NUP1 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
BLOC1S4Q9NUP1 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.65■□□□□ 0.58
BLOC1S4Q9NUP1 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.65■□□□□ 0.58
BLOC1S4Q9NUP1 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BLOC1S4Q9NUP1 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.65■□□□□ 0.58
BLOC1S4Q9NUP1 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.65■□□□□ 0.58
BLOC1S4Q9NUP1 AL031432.2-201ENST00000566714 459 ntBASIC18.65■□□□□ 0.58
BLOC1S4Q9NUP1 AL928711.1-201ENST00000570165 459 ntBASIC18.65■□□□□ 0.58
BLOC1S4Q9NUP1 U1.21-201ENST00000580816 167 ntBASIC18.65■□□□□ 0.58
BLOC1S4Q9NUP1 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.65■□□□□ 0.58
BLOC1S4Q9NUP1 AC004877.2-201ENST00000623941 599 ntBASIC18.65■□□□□ 0.58
BLOC1S4Q9NUP1 AL645728.2-201ENST00000641974 660 ntBASIC18.65■□□□□ 0.58
BLOC1S4Q9NUP1 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BLOC1S4Q9NUP1 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BLOC1S4Q9NUP1 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.65■□□□□ 0.58
BLOC1S4Q9NUP1 AL662844.4-201ENST00000606367 2838 ntBASIC18.65■□□□□ 0.58
BLOC1S4Q9NUP1 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BLOC1S4Q9NUP1 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.65■□□□□ 0.58
BLOC1S4Q9NUP1 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BLOC1S4Q9NUP1 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BLOC1S4Q9NUP1 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BLOC1S4Q9NUP1 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
BLOC1S4Q9NUP1 ZNF259P1-201ENST00000407656 1365 ntBASIC18.65■□□□□ 0.58
BLOC1S4Q9NUP1 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BLOC1S4Q9NUP1 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.65■□□□□ 0.58
BLOC1S4Q9NUP1 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
BLOC1S4Q9NUP1 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BLOC1S4Q9NUP1 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BLOC1S4Q9NUP1 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.65■□□□□ 0.58
BLOC1S4Q9NUP1 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
BLOC1S4Q9NUP1 ME2P1-201ENST00000426028 1970 ntBASIC18.64■□□□□ 0.58
BLOC1S4Q9NUP1 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.58
BLOC1S4Q9NUP1 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BLOC1S4Q9NUP1 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BLOC1S4Q9NUP1 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BLOC1S4Q9NUP1 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.64■□□□□ 0.57
BLOC1S4Q9NUP1 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
BLOC1S4Q9NUP1 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.64■□□□□ 0.57
BLOC1S4Q9NUP1 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BLOC1S4Q9NUP1 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
BLOC1S4Q9NUP1 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms