Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 PGR-209ENST00000617858 2816 ntTSL 5 BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 AC013467.2-201ENST00000605472 835 ntBASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 AC016734.2-201ENST00000624325 1377 ntBASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 AC006277.1-201ENST00000624348 1610 ntBASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 AL365203.3-201ENST00000609742 2057 ntBASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC11.63□□□□□ -0.55
CDC42SE2Q9NRR3 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 KRT18P1-202ENST00000452408 1331 ntBASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 SIGLEC16-201ENST00000599858 1437 ntBASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 FUOM-202ENST00000368551 628 ntTSL 3 BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 RCN1P2-201ENST00000398357 915 ntBASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 LINC00982-205ENST00000420957 435 ntBASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 S100A2-206ENST00000497140 697 ntTSL 2 BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 AC096582.2-201ENST00000510860 516 ntBASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 AL121956.5-201ENST00000625261 221 ntBASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms