Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTN4Q9NQC3 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RTN4Q9NQC3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RTN4Q9NQC3 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTN4Q9NQC3 AL022476.1-201ENST00000443063 2083 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RTN4Q9NQC3 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RTN4Q9NQC3 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RTN4Q9NQC3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.99■□□□□ 0.79
RTN4Q9NQC3 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
RTN4Q9NQC3 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
RTN4Q9NQC3 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTN4Q9NQC3 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTN4Q9NQC3 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
RTN4Q9NQC3 AL928921.2-201ENST00000641325 2442 ntBASIC19.98■□□□□ 0.79
RTN4Q9NQC3 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.98■□□□□ 0.79
RTN4Q9NQC3 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTN4Q9NQC3 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTN4Q9NQC3 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC19.98■□□□□ 0.79
RTN4Q9NQC3 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTN4Q9NQC3 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTN4Q9NQC3 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTN4Q9NQC3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.98■□□□□ 0.79
RTN4Q9NQC3 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC19.98■□□□□ 0.79
RTN4Q9NQC3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
RTN4Q9NQC3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RTN4Q9NQC3 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC19.98■□□□□ 0.79
RTN4Q9NQC3 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
RTN4Q9NQC3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RTN4Q9NQC3 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTN4Q9NQC3 AL355994.1-201ENST00000424379 260 ntBASIC19.98■□□□□ 0.79
RTN4Q9NQC3 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.98■□□□□ 0.79
RTN4Q9NQC3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.98■□□□□ 0.79
RTN4Q9NQC3 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.98■□□□□ 0.79
RTN4Q9NQC3 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.98■□□□□ 0.79
RTN4Q9NQC3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.98■□□□□ 0.79
RTN4Q9NQC3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.98■□□□□ 0.79
RTN4Q9NQC3 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RTN4Q9NQC3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTN4Q9NQC3 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RTN4Q9NQC3 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTN4Q9NQC3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RTN4Q9NQC3 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTN4Q9NQC3 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTN4Q9NQC3 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RTN4Q9NQC3 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.97■□□□□ 0.79
RTN4Q9NQC3 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTN4Q9NQC3 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC19.97■□□□□ 0.79
RTN4Q9NQC3 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTN4Q9NQC3 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTN4Q9NQC3 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTN4Q9NQC3 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC19.97■□□□□ 0.79
RTN4Q9NQC3 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTN4Q9NQC3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RTN4Q9NQC3 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.97■□□□□ 0.79
RTN4Q9NQC3 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RTN4Q9NQC3 CRYGFP-201ENST00000418459 633 ntBASIC19.97■□□□□ 0.79
RTN4Q9NQC3 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.97■□□□□ 0.79
RTN4Q9NQC3 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.97■□□□□ 0.79
RTN4Q9NQC3 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.97■□□□□ 0.79
RTN4Q9NQC3 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.97■□□□□ 0.79
RTN4Q9NQC3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RTN4Q9NQC3 REXO1L10P-201ENST00000615707 1290 ntBASIC19.97■□□□□ 0.79
RTN4Q9NQC3 REXO1L12P-201ENST00000622156 912 ntBASIC19.97■□□□□ 0.79
RTN4Q9NQC3 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RTN4Q9NQC3 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RTN4Q9NQC3 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTN4Q9NQC3 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTN4Q9NQC3 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC19.97■□□□□ 0.79
RTN4Q9NQC3 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC19.97■□□□□ 0.79
RTN4Q9NQC3 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.97■□□□□ 0.79
RTN4Q9NQC3 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTN4Q9NQC3 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.97■□□□□ 0.79
RTN4Q9NQC3 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC19.97■□□□□ 0.79
RTN4Q9NQC3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.97■□□□□ 0.79
RTN4Q9NQC3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTN4Q9NQC3 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
RTN4Q9NQC3 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTN4Q9NQC3 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RTN4Q9NQC3 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RTN4Q9NQC3 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTN4Q9NQC3 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
RTN4Q9NQC3 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
RTN4Q9NQC3 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC19.96■□□□□ 0.79
RTN4Q9NQC3 SULT1A1-211ENST00000569554 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTN4Q9NQC3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.96■□□□□ 0.79
RTN4Q9NQC3 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTN4Q9NQC3 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.96■□□□□ 0.79
RTN4Q9NQC3 KRT8P7-201ENST00000533003 1432 ntBASIC19.96■□□□□ 0.79
RTN4Q9NQC3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.96■□□□□ 0.79
RTN4Q9NQC3 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
RTN4Q9NQC3 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC19.96■□□□□ 0.79
RTN4Q9NQC3 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTN4Q9NQC3 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RTN4Q9NQC3 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.96■□□□□ 0.79
RTN4Q9NQC3 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.96■□□□□ 0.79
RTN4Q9NQC3 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTN4Q9NQC3 AL023803.3-201ENST00000615559 522 ntBASIC19.96■□□□□ 0.79
RTN4Q9NQC3 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTN4Q9NQC3 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTN4Q9NQC3 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms