Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.73■□□□□ 0.91
UPF2Q9HAU5 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
UPF2Q9HAU5 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UPF2Q9HAU5 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
UPF2Q9HAU5 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
UPF2Q9HAU5 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
UPF2Q9HAU5 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC20.73■□□□□ 0.91
UPF2Q9HAU5 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC20.73■□□□□ 0.91
UPF2Q9HAU5 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
UPF2Q9HAU5 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC20.73■□□□□ 0.91
UPF2Q9HAU5 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
UPF2Q9HAU5 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC20.73■□□□□ 0.91
UPF2Q9HAU5 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
UPF2Q9HAU5 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
UPF2Q9HAU5 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
UPF2Q9HAU5 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
UPF2Q9HAU5 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
UPF2Q9HAU5 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.73■□□□□ 0.91
UPF2Q9HAU5 AL137013.1-201ENST00000432946 1228 ntBASIC20.73■□□□□ 0.91
UPF2Q9HAU5 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.73■□□□□ 0.91
UPF2Q9HAU5 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UPF2Q9HAU5 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
UPF2Q9HAU5 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.73■□□□□ 0.91
UPF2Q9HAU5 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.73■□□□□ 0.91
UPF2Q9HAU5 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.73■□□□□ 0.91
UPF2Q9HAU5 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
UPF2Q9HAU5 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.73■□□□□ 0.91
UPF2Q9HAU5 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
UPF2Q9HAU5 AC124864.1-201ENST00000623408 392 ntBASIC20.73■□□□□ 0.91
UPF2Q9HAU5 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.73■□□□□ 0.91
UPF2Q9HAU5 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UPF2Q9HAU5 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
UPF2Q9HAU5 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UPF2Q9HAU5 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
UPF2Q9HAU5 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
UPF2Q9HAU5 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
UPF2Q9HAU5 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC20.73■□□□□ 0.91
UPF2Q9HAU5 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.73■□□□□ 0.91
UPF2Q9HAU5 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
UPF2Q9HAU5 ING5-213ENST00000636051 4199 ntTSL 5 BASIC20.72■□□□□ 0.91
UPF2Q9HAU5 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UPF2Q9HAU5 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC20.72■□□□□ 0.91
UPF2Q9HAU5 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
UPF2Q9HAU5 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.72■□□□□ 0.91
UPF2Q9HAU5 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.72■□□□□ 0.91
UPF2Q9HAU5 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.72■□□□□ 0.91
UPF2Q9HAU5 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.72■□□□□ 0.91
UPF2Q9HAU5 AC087499.1-201ENST00000418141 1075 ntBASIC20.72■□□□□ 0.91
UPF2Q9HAU5 KRT18P38-201ENST00000449496 1282 ntBASIC20.72■□□□□ 0.91
UPF2Q9HAU5 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.72■□□□□ 0.91
UPF2Q9HAU5 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.72■□□□□ 0.91
UPF2Q9HAU5 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.72■□□□□ 0.91
UPF2Q9HAU5 AC005336.2-201ENST00000593183 939 ntBASIC20.72■□□□□ 0.91
UPF2Q9HAU5 AL353801.3-201ENST00000609898 542 ntBASIC20.72■□□□□ 0.91
UPF2Q9HAU5 AL592071.1-201ENST00000611956 408 ntBASIC20.72■□□□□ 0.91
UPF2Q9HAU5 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UPF2Q9HAU5 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
UPF2Q9HAU5 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
UPF2Q9HAU5 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.72■□□□□ 0.91
UPF2Q9HAU5 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UPF2Q9HAU5 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
UPF2Q9HAU5 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UPF2Q9HAU5 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
UPF2Q9HAU5 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
UPF2Q9HAU5 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC20.71■□□□□ 0.91
UPF2Q9HAU5 AC132938.5-201ENST00000624980 1813 ntBASIC20.71■□□□□ 0.91
UPF2Q9HAU5 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC20.71■□□□□ 0.91
UPF2Q9HAU5 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UPF2Q9HAU5 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
UPF2Q9HAU5 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC20.71■□□□□ 0.91
UPF2Q9HAU5 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
UPF2Q9HAU5 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
UPF2Q9HAU5 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
UPF2Q9HAU5 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
UPF2Q9HAU5 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
UPF2Q9HAU5 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UPF2Q9HAU5 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UPF2Q9HAU5 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UPF2Q9HAU5 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
UPF2Q9HAU5 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
UPF2Q9HAU5 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
UPF2Q9HAU5 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
UPF2Q9HAU5 TSPY5P-201ENST00000426936 936 ntBASIC20.71■□□□□ 0.91
UPF2Q9HAU5 AC117947.1-201ENST00000427448 529 ntBASIC20.71■□□□□ 0.91
UPF2Q9HAU5 RN7SL606P-201ENST00000472779 293 ntBASIC20.71■□□□□ 0.91
UPF2Q9HAU5 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
UPF2Q9HAU5 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
UPF2Q9HAU5 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
UPF2Q9HAU5 MIR600HG-201ENST00000449175 5984 ntBASIC20.71■□□□□ 0.91
UPF2Q9HAU5 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
UPF2Q9HAU5 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UPF2Q9HAU5 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UPF2Q9HAU5 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
UPF2Q9HAU5 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
UPF2Q9HAU5 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
UPF2Q9HAU5 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.71■□□□□ 0.91
UPF2Q9HAU5 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC20.71■□□□□ 0.91
UPF2Q9HAU5 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
UPF2Q9HAU5 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UPF2Q9HAU5 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms