Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LRRC40Q9H9A6 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
LRRC40Q9H9A6 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LRRC40Q9H9A6 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.11■□□□□ 0.33
LRRC40Q9H9A6 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC40Q9H9A6 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LRRC40Q9H9A6 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC40Q9H9A6 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC40Q9H9A6 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC40Q9H9A6 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
LRRC40Q9H9A6 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC40Q9H9A6 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LRRC40Q9H9A6 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC40Q9H9A6 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC40Q9H9A6 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC40Q9H9A6 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
LRRC40Q9H9A6 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC40Q9H9A6 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LRRC40Q9H9A6 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC40Q9H9A6 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.1■□□□□ 0.33
LRRC40Q9H9A6 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
LRRC40Q9H9A6 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.1■□□□□ 0.33
LRRC40Q9H9A6 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.1■□□□□ 0.33
LRRC40Q9H9A6 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.1■□□□□ 0.33
LRRC40Q9H9A6 AC018712.1-201ENST00000455767 687 ntBASIC17.1■□□□□ 0.33
LRRC40Q9H9A6 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LRRC40Q9H9A6 AF186996.4-201ENST00000467186 377 ntBASIC17.1■□□□□ 0.33
LRRC40Q9H9A6 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.1■□□□□ 0.33
LRRC40Q9H9A6 SLC25A6P2-201ENST00000497974 877 ntBASIC17.1■□□□□ 0.33
LRRC40Q9H9A6 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.1■□□□□ 0.33
LRRC40Q9H9A6 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.1■□□□□ 0.33
LRRC40Q9H9A6 AC091167.2-201ENST00000579581 588 ntBASIC17.1■□□□□ 0.33
LRRC40Q9H9A6 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.1■□□□□ 0.33
LRRC40Q9H9A6 MPDU1-223ENST00000582151 728 ntBASIC17.1■□□□□ 0.33
LRRC40Q9H9A6 MIR1199-201ENST00000621445 119 ntBASIC17.1■□□□□ 0.33
LRRC40Q9H9A6 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.1■□□□□ 0.33
LRRC40Q9H9A6 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC40Q9H9A6 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC40Q9H9A6 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC40Q9H9A6 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC40Q9H9A6 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC40Q9H9A6 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.1■□□□□ 0.33
LRRC40Q9H9A6 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.1■□□□□ 0.33
LRRC40Q9H9A6 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC40Q9H9A6 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC40Q9H9A6 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LRRC40Q9H9A6 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC40Q9H9A6 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC40Q9H9A6 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC40Q9H9A6 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC40Q9H9A6 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC40Q9H9A6 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.09■□□□□ 0.33
LRRC40Q9H9A6 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRC40Q9H9A6 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC40Q9H9A6 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.09■□□□□ 0.33
LRRC40Q9H9A6 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC40Q9H9A6 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRC40Q9H9A6 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC40Q9H9A6 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRC40Q9H9A6 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LRRC40Q9H9A6 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC40Q9H9A6 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC40Q9H9A6 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRC40Q9H9A6 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
LRRC40Q9H9A6 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRC40Q9H9A6 KRT18P67-201ENST00000432816 1264 ntBASIC17.09■□□□□ 0.33
LRRC40Q9H9A6 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LRRC40Q9H9A6 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRC40Q9H9A6 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.09■□□□□ 0.33
LRRC40Q9H9A6 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.09■□□□□ 0.33
LRRC40Q9H9A6 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.09■□□□□ 0.33
LRRC40Q9H9A6 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
LRRC40Q9H9A6 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.09■□□□□ 0.33
LRRC40Q9H9A6 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC40Q9H9A6 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC40Q9H9A6 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRC40Q9H9A6 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC40Q9H9A6 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC40Q9H9A6 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRC40Q9H9A6 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRC40Q9H9A6 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC40Q9H9A6 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC40Q9H9A6 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
LRRC40Q9H9A6 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC40Q9H9A6 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.09■□□□□ 0.33
LRRC40Q9H9A6 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRC40Q9H9A6 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC40Q9H9A6 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC40Q9H9A6 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LRRC40Q9H9A6 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
LRRC40Q9H9A6 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC40Q9H9A6 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRRC40Q9H9A6 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRRC40Q9H9A6 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
LRRC40Q9H9A6 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRRC40Q9H9A6 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.08■□□□□ 0.33
LRRC40Q9H9A6 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRRC40Q9H9A6 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
LRRC40Q9H9A6 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRRC40Q9H9A6 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms