Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC25.26■■□□□ 1.63
SCAF1Q9H7N4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SCAF1Q9H7N4 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SCAF1Q9H7N4 OR8S1-201ENST00000310194 1080 ntBASIC25.26■■□□□ 1.63
SCAF1Q9H7N4 AC236430.1-201ENST00000402231 743 ntBASIC25.26■■□□□ 1.63
SCAF1Q9H7N4 FAM86GP-201ENST00000448322 971 ntBASIC25.26■■□□□ 1.63
SCAF1Q9H7N4 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC25.26■■□□□ 1.63
SCAF1Q9H7N4 BX005266.1-201ENST00000473402 457 ntBASIC25.26■■□□□ 1.63
SCAF1Q9H7N4 RNA5SP421-201ENST00000516864 134 ntBASIC25.26■■□□□ 1.63
SCAF1Q9H7N4 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC25.26■■□□□ 1.63
SCAF1Q9H7N4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
SCAF1Q9H7N4 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC25.26■■□□□ 1.63
SCAF1Q9H7N4 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC25.26■■□□□ 1.63
SCAF1Q9H7N4 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC25.26■■□□□ 1.63
SCAF1Q9H7N4 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC25.26■■□□□ 1.63
SCAF1Q9H7N4 AC009118.3-201ENST00000622896 873 ntBASIC25.26■■□□□ 1.63
SCAF1Q9H7N4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SCAF1Q9H7N4 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
SCAF1Q9H7N4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SCAF1Q9H7N4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC25.26■■□□□ 1.63
SCAF1Q9H7N4 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SCAF1Q9H7N4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SCAF1Q9H7N4 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SCAF1Q9H7N4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC25.25■■□□□ 1.63
SCAF1Q9H7N4 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC25.25■■□□□ 1.63
SCAF1Q9H7N4 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
SCAF1Q9H7N4 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC25.25■■□□□ 1.63
SCAF1Q9H7N4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC25.25■■□□□ 1.63
SCAF1Q9H7N4 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SCAF1Q9H7N4 INGX-202ENST00000489074 768 ntBASIC25.25■■□□□ 1.63
SCAF1Q9H7N4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SCAF1Q9H7N4 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SCAF1Q9H7N4 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC25.25■■□□□ 1.63
SCAF1Q9H7N4 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SCAF1Q9H7N4 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SCAF1Q9H7N4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC25.25■■□□□ 1.63
SCAF1Q9H7N4 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC25.25■■□□□ 1.63
SCAF1Q9H7N4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
SCAF1Q9H7N4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
SCAF1Q9H7N4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
SCAF1Q9H7N4 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
SCAF1Q9H7N4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC25.24■■□□□ 1.63
SCAF1Q9H7N4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SCAF1Q9H7N4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SCAF1Q9H7N4 DAD1-205ENST00000543337 501 ntTSL 3 BASIC25.24■■□□□ 1.63
SCAF1Q9H7N4 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC25.24■■□□□ 1.63
SCAF1Q9H7N4 MIR4751-201ENST00000578027 74 ntBASIC25.24■■□□□ 1.63
SCAF1Q9H7N4 AL138831.2-201ENST00000606564 490 ntBASIC25.24■■□□□ 1.63
SCAF1Q9H7N4 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC25.24■■□□□ 1.63
SCAF1Q9H7N4 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC25.24■■□□□ 1.63
SCAF1Q9H7N4 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SCAF1Q9H7N4 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
SCAF1Q9H7N4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC25.24■■□□□ 1.63
SCAF1Q9H7N4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
SCAF1Q9H7N4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SCAF1Q9H7N4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
SCAF1Q9H7N4 AL499627.1-201ENST00000569373 2188 ntBASIC25.23■■□□□ 1.63
SCAF1Q9H7N4 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SCAF1Q9H7N4 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
SCAF1Q9H7N4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SCAF1Q9H7N4 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC25.23■■□□□ 1.63
SCAF1Q9H7N4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC25.23■■□□□ 1.63
SCAF1Q9H7N4 AC114550.1-202ENST00000522661 643 ntTSL 2 BASIC25.23■■□□□ 1.63
SCAF1Q9H7N4 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC25.23■■□□□ 1.63
SCAF1Q9H7N4 AC093520.2-201ENST00000561830 333 ntBASIC25.23■■□□□ 1.63
SCAF1Q9H7N4 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC25.23■■□□□ 1.63
SCAF1Q9H7N4 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC25.23■■□□□ 1.63
SCAF1Q9H7N4 CECR7-204ENST00000609932 568 ntTSL 2 BASIC25.23■■□□□ 1.63
SCAF1Q9H7N4 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC25.23■■□□□ 1.63
SCAF1Q9H7N4 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC25.23■■□□□ 1.63
SCAF1Q9H7N4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC25.23■■□□□ 1.63
SCAF1Q9H7N4 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC25.23■■□□□ 1.63
SCAF1Q9H7N4 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SCAF1Q9H7N4 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SCAF1Q9H7N4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
SCAF1Q9H7N4 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC25.23■■□□□ 1.63
SCAF1Q9H7N4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC25.23■■□□□ 1.63
SCAF1Q9H7N4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
SCAF1Q9H7N4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
SCAF1Q9H7N4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
SCAF1Q9H7N4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC25.23■■□□□ 1.63
SCAF1Q9H7N4 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SCAF1Q9H7N4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SCAF1Q9H7N4 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC25.22■■□□□ 1.63
SCAF1Q9H7N4 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SCAF1Q9H7N4 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SCAF1Q9H7N4 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC25.22■■□□□ 1.63
SCAF1Q9H7N4 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC25.22■■□□□ 1.63
SCAF1Q9H7N4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
SCAF1Q9H7N4 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SCAF1Q9H7N4 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SCAF1Q9H7N4 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC25.22■■□□□ 1.63
SCAF1Q9H7N4 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC25.22■■□□□ 1.63
SCAF1Q9H7N4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC25.22■■□□□ 1.63
SCAF1Q9H7N4 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC25.22■■□□□ 1.63
SCAF1Q9H7N4 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
SCAF1Q9H7N4 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC25.22■■□□□ 1.63
SCAF1Q9H7N4 AC144521.1-201ENST00000607148 956 ntBASIC25.22■■□□□ 1.63
SCAF1Q9H7N4 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC25.22■■□□□ 1.63
SCAF1Q9H7N4 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms