Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TUBB1Q9H4B7 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TUBB1Q9H4B7 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.24■□□□□ 0.19
TUBB1Q9H4B7 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TUBB1Q9H4B7 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
TUBB1Q9H4B7 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TUBB1Q9H4B7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.23■□□□□ 0.19
TUBB1Q9H4B7 AL356309.3-201ENST00000624132 1934 ntBASIC16.23■□□□□ 0.19
TUBB1Q9H4B7 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TUBB1Q9H4B7 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TUBB1Q9H4B7 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TUBB1Q9H4B7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.23■□□□□ 0.19
TUBB1Q9H4B7 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TUBB1Q9H4B7 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TUBB1Q9H4B7 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TUBB1Q9H4B7 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TUBB1Q9H4B7 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TUBB1Q9H4B7 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.23■□□□□ 0.19
TUBB1Q9H4B7 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TUBB1Q9H4B7 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TUBB1Q9H4B7 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.23■□□□□ 0.19
TUBB1Q9H4B7 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.23■□□□□ 0.19
TUBB1Q9H4B7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.23■□□□□ 0.19
TUBB1Q9H4B7 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.23■□□□□ 0.19
TUBB1Q9H4B7 AL589182.2-201ENST00000619332 1049 ntBASIC16.23■□□□□ 0.19
TUBB1Q9H4B7 REXO1L3P-201ENST00000622202 1288 ntBASIC16.23■□□□□ 0.19
TUBB1Q9H4B7 AL139288.1-201ENST00000623748 933 ntBASIC16.23■□□□□ 0.19
TUBB1Q9H4B7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.23■□□□□ 0.19
TUBB1Q9H4B7 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TUBB1Q9H4B7 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TUBB1Q9H4B7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TUBB1Q9H4B7 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TUBB1Q9H4B7 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.23■□□□□ 0.19
TUBB1Q9H4B7 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TUBB1Q9H4B7 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.23■□□□□ 0.19
TUBB1Q9H4B7 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TUBB1Q9H4B7 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TUBB1Q9H4B7 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TUBB1Q9H4B7 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TUBB1Q9H4B7 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TUBB1Q9H4B7 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.23■□□□□ 0.19
TUBB1Q9H4B7 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
TUBB1Q9H4B7 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TUBB1Q9H4B7 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 GGT4P-201ENST00000623672 1708 ntBASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 AL031731.1-201ENST00000642131 2094 ntBASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 RBM17P3-201ENST00000417687 1192 ntBASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 MPDU1-223ENST00000582151 728 ntBASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 AC093458.2-201ENST00000623150 629 ntBASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 AC024909.3-201ENST00000611513 2257 ntBASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 AC002310.6-201ENST00000624451 1377 ntBASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TUBB1Q9H4B7 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBB1Q9H4B7 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TUBB1Q9H4B7 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TUBB1Q9H4B7 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TUBB1Q9H4B7 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.21■□□□□ 0.19
TUBB1Q9H4B7 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
TUBB1Q9H4B7 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBB1Q9H4B7 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBB1Q9H4B7 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.21■□□□□ 0.19
TUBB1Q9H4B7 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms