Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
HIPK3Q9H422 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIPK3Q9H422 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIPK3Q9H422 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.29■□□□□ 0.52
HIPK3Q9H422 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIPK3Q9H422 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC18.29■□□□□ 0.52
HIPK3Q9H422 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIPK3Q9H422 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIPK3Q9H422 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIPK3Q9H422 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIPK3Q9H422 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIPK3Q9H422 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIPK3Q9H422 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
HIPK3Q9H422 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.28■□□□□ 0.52
HIPK3Q9H422 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIPK3Q9H422 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIPK3Q9H422 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIPK3Q9H422 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIPK3Q9H422 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.28■□□□□ 0.52
HIPK3Q9H422 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIPK3Q9H422 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
HIPK3Q9H422 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIPK3Q9H422 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
HIPK3Q9H422 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIPK3Q9H422 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIPK3Q9H422 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HIPK3Q9H422 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.28■□□□□ 0.52
HIPK3Q9H422 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
HIPK3Q9H422 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
HIPK3Q9H422 RPL37AP1-201ENST00000412502 279 ntBASIC18.28■□□□□ 0.52
HIPK3Q9H422 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC18.28■□□□□ 0.52
HIPK3Q9H422 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.28■□□□□ 0.52
HIPK3Q9H422 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.28■□□□□ 0.52
HIPK3Q9H422 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC18.28■□□□□ 0.52
HIPK3Q9H422 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC18.28■□□□□ 0.52
HIPK3Q9H422 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HIPK3Q9H422 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HIPK3Q9H422 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.28■□□□□ 0.52
HIPK3Q9H422 HILS1-202ENST00000545329 423 ntBASIC18.28■□□□□ 0.52
HIPK3Q9H422 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.28■□□□□ 0.52
HIPK3Q9H422 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.28■□□□□ 0.52
HIPK3Q9H422 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.28■□□□□ 0.52
HIPK3Q9H422 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.28■□□□□ 0.52
HIPK3Q9H422 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.28■□□□□ 0.52
HIPK3Q9H422 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.28■□□□□ 0.52
HIPK3Q9H422 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.28■□□□□ 0.52
HIPK3Q9H422 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
HIPK3Q9H422 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIPK3Q9H422 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIPK3Q9H422 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.28■□□□□ 0.52
HIPK3Q9H422 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HIPK3Q9H422 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIPK3Q9H422 AL021920.2-201ENST00000624828 1351 ntBASIC18.28■□□□□ 0.52
HIPK3Q9H422 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
HIPK3Q9H422 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.28■□□□□ 0.52
HIPK3Q9H422 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HIPK3Q9H422 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
HIPK3Q9H422 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIPK3Q9H422 AC018470.1-201ENST00000624790 3129 ntBASIC18.27■□□□□ 0.52
HIPK3Q9H422 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HIPK3Q9H422 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HIPK3Q9H422 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
HIPK3Q9H422 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HIPK3Q9H422 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HIPK3Q9H422 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
HIPK3Q9H422 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HIPK3Q9H422 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.27■□□□□ 0.52
HIPK3Q9H422 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.27■□□□□ 0.52
HIPK3Q9H422 GIMAP3P-201ENST00000495150 836 ntBASIC18.27■□□□□ 0.52
HIPK3Q9H422 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.27■□□□□ 0.52
HIPK3Q9H422 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
HIPK3Q9H422 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.27■□□□□ 0.52
HIPK3Q9H422 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
HIPK3Q9H422 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.27■□□□□ 0.52
HIPK3Q9H422 RN7SL828P-201ENST00000607615 303 ntBASIC18.27■□□□□ 0.52
HIPK3Q9H422 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.27■□□□□ 0.52
HIPK3Q9H422 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HIPK3Q9H422 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
HIPK3Q9H422 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.27■□□□□ 0.51
HIPK3Q9H422 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HIPK3Q9H422 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.26■□□□□ 0.51
HIPK3Q9H422 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
HIPK3Q9H422 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.26■□□□□ 0.51
HIPK3Q9H422 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.26■□□□□ 0.51
HIPK3Q9H422 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
HIPK3Q9H422 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HIPK3Q9H422 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIPK3Q9H422 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIPK3Q9H422 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIPK3Q9H422 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
HIPK3Q9H422 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.26■□□□□ 0.51
HIPK3Q9H422 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIPK3Q9H422 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.26■□□□□ 0.51
HIPK3Q9H422 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
HIPK3Q9H422 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
HIPK3Q9H422 MIR4492-201ENST00000581627 80 ntBASIC18.26■□□□□ 0.51
HIPK3Q9H422 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.26■□□□□ 0.51
HIPK3Q9H422 AC004840.1-201ENST00000636359 365 ntBASIC18.26■□□□□ 0.51
HIPK3Q9H422 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
HIPK3Q9H422 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms