Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
UBQLN3Q9H347 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
UBQLN3Q9H347 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
UBQLN3Q9H347 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.63■□□□□ 0.09
UBQLN3Q9H347 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
UBQLN3Q9H347 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.63■□□□□ 0.09
UBQLN3Q9H347 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBQLN3Q9H347 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
UBQLN3Q9H347 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
UBQLN3Q9H347 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.63■□□□□ 0.09
UBQLN3Q9H347 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBQLN3Q9H347 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
UBQLN3Q9H347 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
UBQLN3Q9H347 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.63■□□□□ 0.09
UBQLN3Q9H347 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.63■□□□□ 0.09
UBQLN3Q9H347 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.63■□□□□ 0.09
UBQLN3Q9H347 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBQLN3Q9H347 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
UBQLN3Q9H347 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.62■□□□□ 0.09
UBQLN3Q9H347 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
UBQLN3Q9H347 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
UBQLN3Q9H347 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.62■□□□□ 0.09
UBQLN3Q9H347 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UBQLN3Q9H347 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
UBQLN3Q9H347 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UBQLN3Q9H347 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.62■□□□□ 0.09
UBQLN3Q9H347 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.62■□□□□ 0.09
UBQLN3Q9H347 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
UBQLN3Q9H347 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
UBQLN3Q9H347 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UBQLN3Q9H347 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
UBQLN3Q9H347 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
UBQLN3Q9H347 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.62■□□□□ 0.09
UBQLN3Q9H347 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.62■□□□□ 0.09
UBQLN3Q9H347 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
UBQLN3Q9H347 KRT18P3-201ENST00000451602 1288 ntBASIC15.62■□□□□ 0.09
UBQLN3Q9H347 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.62■□□□□ 0.09
UBQLN3Q9H347 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.62■□□□□ 0.09
UBQLN3Q9H347 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
UBQLN3Q9H347 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.62■□□□□ 0.09
UBQLN3Q9H347 GGTLC5P-201ENST00000617623 998 ntBASIC15.62■□□□□ 0.09
UBQLN3Q9H347 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
UBQLN3Q9H347 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
UBQLN3Q9H347 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
UBQLN3Q9H347 PMS2P7-201ENST00000506558 1336 ntBASIC15.62■□□□□ 0.09
UBQLN3Q9H347 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
UBQLN3Q9H347 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UBQLN3Q9H347 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.62■□□□□ 0.09
UBQLN3Q9H347 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.62■□□□□ 0.09
UBQLN3Q9H347 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
UBQLN3Q9H347 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UBQLN3Q9H347 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UBQLN3Q9H347 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
UBQLN3Q9H347 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
UBQLN3Q9H347 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
UBQLN3Q9H347 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
UBQLN3Q9H347 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
UBQLN3Q9H347 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
UBQLN3Q9H347 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
UBQLN3Q9H347 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
UBQLN3Q9H347 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.61■□□□□ 0.09
UBQLN3Q9H347 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.61■□□□□ 0.09
UBQLN3Q9H347 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.61■□□□□ 0.09
UBQLN3Q9H347 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
UBQLN3Q9H347 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
UBQLN3Q9H347 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
UBQLN3Q9H347 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.61■□□□□ 0.09
UBQLN3Q9H347 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.61■□□□□ 0.09
UBQLN3Q9H347 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
UBQLN3Q9H347 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
UBQLN3Q9H347 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.61■□□□□ 0.09
UBQLN3Q9H347 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.61■□□□□ 0.09
UBQLN3Q9H347 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.61■□□□□ 0.09
UBQLN3Q9H347 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.61■□□□□ 0.09
UBQLN3Q9H347 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.61■□□□□ 0.09
UBQLN3Q9H347 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.61■□□□□ 0.09
UBQLN3Q9H347 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.61■□□□□ 0.09
UBQLN3Q9H347 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
UBQLN3Q9H347 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
UBQLN3Q9H347 AC023511.2-201ENST00000618803 211 ntBASIC15.61■□□□□ 0.09
UBQLN3Q9H347 AC004790.2-201ENST00000623588 572 ntBASIC15.61■□□□□ 0.09
UBQLN3Q9H347 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.61■□□□□ 0.09
UBQLN3Q9H347 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
UBQLN3Q9H347 AC092171.3-201ENST00000610122 2651 ntBASIC15.61■□□□□ 0.09
UBQLN3Q9H347 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
UBQLN3Q9H347 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
UBQLN3Q9H347 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
UBQLN3Q9H347 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
UBQLN3Q9H347 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.61■□□□□ 0.09
UBQLN3Q9H347 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
UBQLN3Q9H347 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
UBQLN3Q9H347 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
UBQLN3Q9H347 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
UBQLN3Q9H347 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.61■□□□□ 0.09
UBQLN3Q9H347 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
UBQLN3Q9H347 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
UBQLN3Q9H347 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
UBQLN3Q9H347 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.61■□□□□ 0.09
UBQLN3Q9H347 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.61■□□□□ 0.09
UBQLN3Q9H347 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms