Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 AC004461.2-201ENST00000629517 803 ntBASIC20.92■□□□□ 0.94
CNTNAP4Q9C0A0 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC20.92■□□□□ 0.94
CNTNAP4Q9C0A0 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNTNAP4Q9C0A0 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CNTNAP4Q9C0A0 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CNTNAP4Q9C0A0 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNTNAP4Q9C0A0 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CNTNAP4Q9C0A0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CNTNAP4Q9C0A0 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CNTNAP4Q9C0A0 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNTNAP4Q9C0A0 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNTNAP4Q9C0A0 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CNTNAP4Q9C0A0 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNTNAP4Q9C0A0 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC20.91■□□□□ 0.94
CNTNAP4Q9C0A0 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNTNAP4Q9C0A0 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC20.91■□□□□ 0.94
CNTNAP4Q9C0A0 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CNTNAP4Q9C0A0 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
CNTNAP4Q9C0A0 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNTNAP4Q9C0A0 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNTNAP4Q9C0A0 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CNTNAP4Q9C0A0 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CNTNAP4Q9C0A0 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNTNAP4Q9C0A0 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNTNAP4Q9C0A0 TTTY23B-201ENST00000442790 549 ntBASIC20.91■□□□□ 0.94
CNTNAP4Q9C0A0 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNTNAP4Q9C0A0 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC20.91■□□□□ 0.94
CNTNAP4Q9C0A0 ELK1P1-201ENST00000485699 580 ntBASIC20.91■□□□□ 0.94
CNTNAP4Q9C0A0 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CNTNAP4Q9C0A0 SDHAP3-202ENST00000515467 728 ntBASIC20.91■□□□□ 0.94
CNTNAP4Q9C0A0 FTH1-202ENST00000526640 786 ntTSL 2 BASIC20.91■□□□□ 0.94
CNTNAP4Q9C0A0 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC20.91■□□□□ 0.94
CNTNAP4Q9C0A0 AC024267.1-201ENST00000582320 895 ntBASIC20.91■□□□□ 0.94
CNTNAP4Q9C0A0 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNTNAP4Q9C0A0 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC20.91■□□□□ 0.94
CNTNAP4Q9C0A0 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC20.91■□□□□ 0.94
CNTNAP4Q9C0A0 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC20.91■□□□□ 0.94
CNTNAP4Q9C0A0 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CNTNAP4Q9C0A0 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CNTNAP4Q9C0A0 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CNTNAP4Q9C0A0 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNTNAP4Q9C0A0 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CNTNAP4Q9C0A0 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CNTNAP4Q9C0A0 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CNTNAP4Q9C0A0 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.91■□□□□ 0.94
CNTNAP4Q9C0A0 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.91■□□□□ 0.94
CNTNAP4Q9C0A0 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNTNAP4Q9C0A0 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.9■□□□□ 0.94
CNTNAP4Q9C0A0 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNTNAP4Q9C0A0 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC20.9■□□□□ 0.94
CNTNAP4Q9C0A0 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CNTNAP4Q9C0A0 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC20.9■□□□□ 0.94
CNTNAP4Q9C0A0 MEP1AP4-201ENST00000423244 1087 ntBASIC20.9■□□□□ 0.94
CNTNAP4Q9C0A0 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC20.9■□□□□ 0.94
CNTNAP4Q9C0A0 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CNTNAP4Q9C0A0 FUZ-207ENST00000526575 482 ntTSL 4 BASIC20.9■□□□□ 0.94
CNTNAP4Q9C0A0 TPRX2P-201ENST00000535362 881 ntBASIC20.9■□□□□ 0.94
CNTNAP4Q9C0A0 AC023310.3-201ENST00000557027 670 ntBASIC20.9■□□□□ 0.94
CNTNAP4Q9C0A0 AC100756.1-201ENST00000562736 682 ntBASIC20.9■□□□□ 0.94
CNTNAP4Q9C0A0 AC138749.3-201ENST00000567691 622 ntBASIC20.9■□□□□ 0.94
CNTNAP4Q9C0A0 AC116165.1-201ENST00000611806 668 ntBASIC20.9■□□□□ 0.94
CNTNAP4Q9C0A0 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC20.9■□□□□ 0.94
CNTNAP4Q9C0A0 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CNTNAP4Q9C0A0 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNTNAP4Q9C0A0 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.9■□□□□ 0.94
CNTNAP4Q9C0A0 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNTNAP4Q9C0A0 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNTNAP4Q9C0A0 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNTNAP4Q9C0A0 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CNTNAP4Q9C0A0 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CNTNAP4Q9C0A0 AL589702.1-201ENST00000641229 1509 ntBASIC20.89■□□□□ 0.94
CNTNAP4Q9C0A0 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CNTNAP4Q9C0A0 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
CNTNAP4Q9C0A0 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.89■□□□□ 0.94
CNTNAP4Q9C0A0 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CNTNAP4Q9C0A0 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.89■□□□□ 0.94
CNTNAP4Q9C0A0 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.89■□□□□ 0.93
CNTNAP4Q9C0A0 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNTNAP4Q9C0A0 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC20.89■□□□□ 0.93
CNTNAP4Q9C0A0 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNTNAP4Q9C0A0 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CNTNAP4Q9C0A0 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC20.89■□□□□ 0.93
CNTNAP4Q9C0A0 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC20.89■□□□□ 0.93
CNTNAP4Q9C0A0 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC20.89■□□□□ 0.93
CNTNAP4Q9C0A0 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC20.89■□□□□ 0.93
CNTNAP4Q9C0A0 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNTNAP4Q9C0A0 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC20.89■□□□□ 0.93
CNTNAP4Q9C0A0 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNTNAP4Q9C0A0 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC20.89■□□□□ 0.93
CNTNAP4Q9C0A0 AC026979.3-201ENST00000607315 403 ntBASIC20.89■□□□□ 0.93
CNTNAP4Q9C0A0 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC20.89■□□□□ 0.93
CNTNAP4Q9C0A0 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CNTNAP4Q9C0A0 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNTNAP4Q9C0A0 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNTNAP4Q9C0A0 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CNTNAP4Q9C0A0 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CNTNAP4Q9C0A0 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNTNAP4Q9C0A0 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNTNAP4Q9C0A0 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC20.89■□□□□ 0.93
CNTNAP4Q9C0A0 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms