Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SMIM3Q9BZL3 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.83□□□□□ -0.2
SMIM3Q9BZL3 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
SMIM3Q9BZL3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC13.83□□□□□ -0.2
SMIM3Q9BZL3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SMIM3Q9BZL3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SMIM3Q9BZL3 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 ESRRAP1-201ENST00000400596 1257 ntBASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 PVRIG2P-201ENST00000435460 978 ntBASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 NUDT16P1-203ENST00000513809 620 ntBASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 MIR3917-201ENST00000580971 93 ntBASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 GRAMD4P8-201ENST00000605465 1115 ntBASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 AC073648.6-201ENST00000641589 218 ntBASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM3Q9BZL3 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM3Q9BZL3 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM3Q9BZL3 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SMIM3Q9BZL3 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM3Q9BZL3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM3Q9BZL3 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM3Q9BZL3 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM3Q9BZL3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
SMIM3Q9BZL3 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.81□□□□□ -0.2
SMIM3Q9BZL3 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM3Q9BZL3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC13.81□□□□□ -0.2
SMIM3Q9BZL3 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SMIM3Q9BZL3 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM3Q9BZL3 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM3Q9BZL3 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM3Q9BZL3 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM3Q9BZL3 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM3Q9BZL3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM3Q9BZL3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM3Q9BZL3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC13.81□□□□□ -0.2
SMIM3Q9BZL3 USF2-205ENST00000594064 1179 ntTSL 2 BASIC13.81□□□□□ -0.2
SMIM3Q9BZL3 AC104771.1-201ENST00000603335 964 ntBASIC13.81□□□□□ -0.2
SMIM3Q9BZL3 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
SMIM3Q9BZL3 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM3Q9BZL3 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SMIM3Q9BZL3 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.81□□□□□ -0.2
SMIM3Q9BZL3 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM3Q9BZL3 PRAL-201ENST00000624952 3286 ntBASIC13.81□□□□□ -0.2
SMIM3Q9BZL3 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SMIM3Q9BZL3 ME2P1-201ENST00000426028 1970 ntBASIC13.81□□□□□ -0.2
SMIM3Q9BZL3 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM3Q9BZL3 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM3Q9BZL3 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM3Q9BZL3 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM3Q9BZL3 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM3Q9BZL3 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM3Q9BZL3 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM3Q9BZL3 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SMIM3Q9BZL3 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.8□□□□□ -0.2
SMIM3Q9BZL3 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM3Q9BZL3 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.8□□□□□ -0.2
SMIM3Q9BZL3 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.8□□□□□ -0.2
SMIM3Q9BZL3 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SMIM3Q9BZL3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM3Q9BZL3 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM3Q9BZL3 TNRC18P2-201ENST00000417666 2714 ntBASIC13.8□□□□□ -0.2
SMIM3Q9BZL3 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms