Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.1■□□□□ 0.49
SNX27Q96L92 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX27Q96L92 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SNX27Q96L92 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.1■□□□□ 0.49
SNX27Q96L92 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SNX27Q96L92 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SNX27Q96L92 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX27Q96L92 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.1■□□□□ 0.49
SNX27Q96L92 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.1■□□□□ 0.49
SNX27Q96L92 SNX33P1-201ENST00000592116 1762 ntBASIC18.1■□□□□ 0.49
SNX27Q96L92 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX27Q96L92 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.1■□□□□ 0.49
SNX27Q96L92 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SNX27Q96L92 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.1■□□□□ 0.49
SNX27Q96L92 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SNX27Q96L92 WASH6P-202ENST00000359512 1437 ntBASIC18.1■□□□□ 0.49
SNX27Q96L92 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.1■□□□□ 0.49
SNX27Q96L92 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX27Q96L92 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX27Q96L92 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SNX27Q96L92 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.1■□□□□ 0.49
SNX27Q96L92 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.1■□□□□ 0.49
SNX27Q96L92 AC079140.1-201ENST00000508039 487 ntBASIC18.1■□□□□ 0.49
SNX27Q96L92 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.1■□□□□ 0.49
SNX27Q96L92 AC069262.1-201ENST00000539058 672 ntBASIC18.1■□□□□ 0.49
SNX27Q96L92 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SNX27Q96L92 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
SNX27Q96L92 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.1■□□□□ 0.49
SNX27Q96L92 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX27Q96L92 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX27Q96L92 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX27Q96L92 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.1■□□□□ 0.49
SNX27Q96L92 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX27Q96L92 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SNX27Q96L92 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX27Q96L92 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.09■□□□□ 0.49
SNX27Q96L92 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX27Q96L92 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX27Q96L92 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX27Q96L92 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SNX27Q96L92 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.09■□□□□ 0.49
SNX27Q96L92 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.09■□□□□ 0.49
SNX27Q96L92 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX27Q96L92 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX27Q96L92 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
SNX27Q96L92 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.09■□□□□ 0.49
SNX27Q96L92 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.09■□□□□ 0.49
SNX27Q96L92 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.09■□□□□ 0.49
SNX27Q96L92 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.09■□□□□ 0.49
SNX27Q96L92 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.09■□□□□ 0.49
SNX27Q96L92 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.09■□□□□ 0.49
SNX27Q96L92 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.09■□□□□ 0.49
SNX27Q96L92 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.09■□□□□ 0.49
SNX27Q96L92 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.09■□□□□ 0.49
SNX27Q96L92 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.09■□□□□ 0.49
SNX27Q96L92 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.09■□□□□ 0.49
SNX27Q96L92 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX27Q96L92 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SNX27Q96L92 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.09■□□□□ 0.49
SNX27Q96L92 AC021097.1-201ENST00000607902 574 ntBASIC18.09■□□□□ 0.49
SNX27Q96L92 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.09■□□□□ 0.49
SNX27Q96L92 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.09■□□□□ 0.49
SNX27Q96L92 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.09■□□□□ 0.49
SNX27Q96L92 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX27Q96L92 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX27Q96L92 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX27Q96L92 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX27Q96L92 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX27Q96L92 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SNX27Q96L92 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX27Q96L92 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX27Q96L92 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.09■□□□□ 0.49
SNX27Q96L92 AC016027.1-202ENST00000607927 1699 ntBASIC18.09■□□□□ 0.49
SNX27Q96L92 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX27Q96L92 AL671710.1-201ENST00000610245 2349 ntBASIC18.09■□□□□ 0.49
SNX27Q96L92 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX27Q96L92 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SNX27Q96L92 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
SNX27Q96L92 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
SNX27Q96L92 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SNX27Q96L92 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SNX27Q96L92 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.49
SNX27Q96L92 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SNX27Q96L92 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
SNX27Q96L92 AC011270.2-201ENST00000624293 2550 ntBASIC18.08■□□□□ 0.49
SNX27Q96L92 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SNX27Q96L92 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SNX27Q96L92 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SNX27Q96L92 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SNX27Q96L92 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SNX27Q96L92 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
SNX27Q96L92 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNX27Q96L92 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNX27Q96L92 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
SNX27Q96L92 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNX27Q96L92 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNX27Q96L92 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNX27Q96L92 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.08■□□□□ 0.48
SNX27Q96L92 AC004945.1-201ENST00000416738 983 ntBASIC18.08■□□□□ 0.48
SNX27Q96L92 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms