Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
ECHDC3Q96DC8 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
ECHDC3Q96DC8 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.78■□□□□ 0.28
ECHDC3Q96DC8 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
ECHDC3Q96DC8 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
ECHDC3Q96DC8 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ECHDC3Q96DC8 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ECHDC3Q96DC8 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
ECHDC3Q96DC8 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.78■□□□□ 0.28
ECHDC3Q96DC8 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ECHDC3Q96DC8 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ECHDC3Q96DC8 HLA-J-202ENST00000469281 1241 ntBASIC16.78■□□□□ 0.28
ECHDC3Q96DC8 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.78■□□□□ 0.28
ECHDC3Q96DC8 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.78■□□□□ 0.28
ECHDC3Q96DC8 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.78■□□□□ 0.28
ECHDC3Q96DC8 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
ECHDC3Q96DC8 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
ECHDC3Q96DC8 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
ECHDC3Q96DC8 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ECHDC3Q96DC8 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
ECHDC3Q96DC8 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.78■□□□□ 0.28
ECHDC3Q96DC8 RNF216P1-203ENST00000404404 2427 ntBASIC16.78■□□□□ 0.28
ECHDC3Q96DC8 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
ECHDC3Q96DC8 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.78■□□□□ 0.28
ECHDC3Q96DC8 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
ECHDC3Q96DC8 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
ECHDC3Q96DC8 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
ECHDC3Q96DC8 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.77■□□□□ 0.28
ECHDC3Q96DC8 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
ECHDC3Q96DC8 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
ECHDC3Q96DC8 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
ECHDC3Q96DC8 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.77■□□□□ 0.28
ECHDC3Q96DC8 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ECHDC3Q96DC8 AKAP8P1-201ENST00000434743 1349 ntBASIC16.77■□□□□ 0.28
ECHDC3Q96DC8 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ECHDC3Q96DC8 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ECHDC3Q96DC8 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ECHDC3Q96DC8 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.77■□□□□ 0.28
ECHDC3Q96DC8 AL512652.2-201ENST00000625156 1716 ntBASIC16.77■□□□□ 0.28
ECHDC3Q96DC8 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
ECHDC3Q96DC8 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.77■□□□□ 0.28
ECHDC3Q96DC8 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ECHDC3Q96DC8 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.77■□□□□ 0.28
ECHDC3Q96DC8 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.77■□□□□ 0.28
ECHDC3Q96DC8 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.28
ECHDC3Q96DC8 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
ECHDC3Q96DC8 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.77■□□□□ 0.28
ECHDC3Q96DC8 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.77■□□□□ 0.28
ECHDC3Q96DC8 FAM86C2P-203ENST00000528684 1004 ntBASIC16.77■□□□□ 0.28
ECHDC3Q96DC8 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
ECHDC3Q96DC8 RARRES2P8-201ENST00000566335 367 ntBASIC16.77■□□□□ 0.28
ECHDC3Q96DC8 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ECHDC3Q96DC8 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
ECHDC3Q96DC8 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.77■□□□□ 0.28
ECHDC3Q96DC8 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
ECHDC3Q96DC8 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.77■□□□□ 0.28
ECHDC3Q96DC8 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.77■□□□□ 0.28
ECHDC3Q96DC8 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.77■□□□□ 0.28
ECHDC3Q96DC8 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.77■□□□□ 0.27
ECHDC3Q96DC8 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
ECHDC3Q96DC8 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ECHDC3Q96DC8 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.77■□□□□ 0.27
ECHDC3Q96DC8 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
ECHDC3Q96DC8 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.77■□□□□ 0.27
ECHDC3Q96DC8 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ECHDC3Q96DC8 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ECHDC3Q96DC8 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.77■□□□□ 0.27
ECHDC3Q96DC8 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
ECHDC3Q96DC8 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 AL671277.1-201ENST00000429656 993 ntBASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 AL513210.1-201ENST00000629608 234 ntBASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 AC105339.1-204ENST00000636249 355 ntBASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms