Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.06■□□□□ 0.16
LRRC58Q96CX6 KRT8P49-201ENST00000604166 1432 ntBASIC16.06■□□□□ 0.16
LRRC58Q96CX6 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC58Q96CX6 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC58Q96CX6 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.06■□□□□ 0.16
LRRC58Q96CX6 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.06■□□□□ 0.16
LRRC58Q96CX6 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.06■□□□□ 0.16
LRRC58Q96CX6 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC58Q96CX6 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC58Q96CX6 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC58Q96CX6 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
LRRC58Q96CX6 KRT18P57-201ENST00000443599 1254 ntBASIC16.06■□□□□ 0.16
LRRC58Q96CX6 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC58Q96CX6 AC091607.1-201ENST00000490318 1060 ntBASIC16.06■□□□□ 0.16
LRRC58Q96CX6 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.06■□□□□ 0.16
LRRC58Q96CX6 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.06■□□□□ 0.16
LRRC58Q96CX6 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.06■□□□□ 0.16
LRRC58Q96CX6 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC58Q96CX6 AC013467.2-201ENST00000605472 835 ntBASIC16.06■□□□□ 0.16
LRRC58Q96CX6 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC58Q96CX6 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC58Q96CX6 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC58Q96CX6 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.06■□□□□ 0.16
LRRC58Q96CX6 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
LRRC58Q96CX6 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC58Q96CX6 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC58Q96CX6 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC58Q96CX6 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.06■□□□□ 0.16
LRRC58Q96CX6 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC58Q96CX6 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 VENTXP7-201ENST00000475503 772 ntBASIC16.05■□□□□ 0.16
LRRC58Q96CX6 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 KRT8P26-201ENST00000534154 1276 ntBASIC16.05■□□□□ 0.16
LRRC58Q96CX6 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.05■□□□□ 0.16
LRRC58Q96CX6 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.05■□□□□ 0.16
LRRC58Q96CX6 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC58Q96CX6 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.04■□□□□ 0.16
LRRC58Q96CX6 TP73-AS1-210ENST00000637775 1455 ntBASIC16.04■□□□□ 0.16
LRRC58Q96CX6 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC58Q96CX6 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC58Q96CX6 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
LRRC58Q96CX6 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.04■□□□□ 0.16
LRRC58Q96CX6 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC58Q96CX6 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC58Q96CX6 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC58Q96CX6 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LRRC58Q96CX6 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC58Q96CX6 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC58Q96CX6 AL671277.2-201ENST00000458060 996 ntBASIC16.04■□□□□ 0.16
LRRC58Q96CX6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.04■□□□□ 0.16
LRRC58Q96CX6 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.04■□□□□ 0.16
LRRC58Q96CX6 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
LRRC58Q96CX6 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.04■□□□□ 0.16
LRRC58Q96CX6 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC58Q96CX6 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.04■□□□□ 0.16
LRRC58Q96CX6 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
LRRC58Q96CX6 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms