Protein–RNA interactions for Protein: Q8WXC6

COPS9, COP9 signalosome complex subunit 9, humanhuman

Predictions only

Length 57 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9Q8WXC6 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 AC004911.1-201ENST00000416316 871 ntBASIC11.42□□□□□ -0.58
COPS9Q8WXC6 B3GAT3P1-201ENST00000471720 806 ntBASIC11.42□□□□□ -0.58
COPS9Q8WXC6 IGHV3-52-201ENST00000519770 353 ntBASIC11.42□□□□□ -0.58
COPS9Q8WXC6 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 AL138781.1-201ENST00000566567 1274 ntBASIC11.42□□□□□ -0.58
COPS9Q8WXC6 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 MIR6821-201ENST00000617625 74 ntBASIC11.42□□□□□ -0.58
COPS9Q8WXC6 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 AC092850.2-201ENST00000623821 2697 ntBASIC11.42□□□□□ -0.58
COPS9Q8WXC6 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
COPS9Q8WXC6 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 AL391256.1-201ENST00000443260 1855 ntBASIC11.41□□□□□ -0.58
COPS9Q8WXC6 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 AC026185.1-201ENST00000445748 174 ntBASIC11.41□□□□□ -0.58
COPS9Q8WXC6 RPS2P4-201ENST00000476944 856 ntBASIC11.41□□□□□ -0.58
COPS9Q8WXC6 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 RNF121-214ENST00000533380 870 ntTSL 3 BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 ME2P1-201ENST00000426028 1970 ntBASIC11.41□□□□□ -0.58
COPS9Q8WXC6 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC11.41□□□□□ -0.58
COPS9Q8WXC6 KRT8P47-201ENST00000604727 1398 ntBASIC11.41□□□□□ -0.58
COPS9Q8WXC6 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
COPS9Q8WXC6 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
COPS9Q8WXC6 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
COPS9Q8WXC6 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
COPS9Q8WXC6 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
COPS9Q8WXC6 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC11.4□□□□□ -0.58
COPS9Q8WXC6 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
COPS9Q8WXC6 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
COPS9Q8WXC6 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
COPS9Q8WXC6 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
COPS9Q8WXC6 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
COPS9Q8WXC6 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
COPS9Q8WXC6 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
COPS9Q8WXC6 MIR638-201ENST00000385237 100 ntBASIC11.4□□□□□ -0.58
COPS9Q8WXC6 MFAP1P1-201ENST00000442257 1255 ntBASIC11.4□□□□□ -0.58
COPS9Q8WXC6 AC008040.2-201ENST00000461049 708 ntBASIC11.4□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms