Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 GLI3-203ENST00000437480 451 ntTSL 2 BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 RPPH1-201ENST00000516869 333 ntBASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 DUX4L17-201ENST00000557360 1267 ntBASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 STK25P1-201ENST00000585406 838 ntBASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 AL009178.2-201ENST00000597278 2719 ntBASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.24□□□□□ -0.29
MBD3L1Q8WWY6 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.23□□□□□ -0.29
MBD3L1Q8WWY6 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L1Q8WWY6 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L1Q8WWY6 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L1Q8WWY6 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L1Q8WWY6 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L1Q8WWY6 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L1Q8WWY6 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L1Q8WWY6 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L1Q8WWY6 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L1Q8WWY6 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L1Q8WWY6 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
MBD3L1Q8WWY6 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L1Q8WWY6 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L1Q8WWY6 CDC14C-201ENST00000428251 1719 ntBASIC13.23□□□□□ -0.29
MBD3L1Q8WWY6 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L1Q8WWY6 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L1Q8WWY6 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC13.23□□□□□ -0.29
MBD3L1Q8WWY6 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC13.23□□□□□ -0.29
MBD3L1Q8WWY6 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC13.23□□□□□ -0.29
MBD3L1Q8WWY6 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L1Q8WWY6 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC13.23□□□□□ -0.29
MBD3L1Q8WWY6 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC13.23□□□□□ -0.29
MBD3L1Q8WWY6 AC104771.1-201ENST00000603335 964 ntBASIC13.23□□□□□ -0.29
MBD3L1Q8WWY6 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
MBD3L1Q8WWY6 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.23□□□□□ -0.29
MBD3L1Q8WWY6 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC13.23□□□□□ -0.29
MBD3L1Q8WWY6 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L1Q8WWY6 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L1Q8WWY6 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L1Q8WWY6 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L1Q8WWY6 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.23□□□□□ -0.29
MBD3L1Q8WWY6 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
MBD3L1Q8WWY6 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L1Q8WWY6 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
MBD3L1Q8WWY6 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L1Q8WWY6 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L1Q8WWY6 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L1Q8WWY6 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.23□□□□□ -0.29
MBD3L1Q8WWY6 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms