Protein–RNA interactions for Protein: Q8WW43

APH1B, Gamma-secretase subunit APH-1B, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1BQ8WW43 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
APH1BQ8WW43 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
APH1BQ8WW43 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.26■□□□□ 0.03
APH1BQ8WW43 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
APH1BQ8WW43 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
APH1BQ8WW43 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
APH1BQ8WW43 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
APH1BQ8WW43 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
APH1BQ8WW43 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
APH1BQ8WW43 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.25■□□□□ 0.03
APH1BQ8WW43 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
APH1BQ8WW43 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.25■□□□□ 0.03
APH1BQ8WW43 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
APH1BQ8WW43 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.25■□□□□ 0.03
APH1BQ8WW43 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
APH1BQ8WW43 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
APH1BQ8WW43 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.25■□□□□ 0.03
APH1BQ8WW43 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
APH1BQ8WW43 AL671710.1-201ENST00000610245 2349 ntBASIC15.25■□□□□ 0.03
APH1BQ8WW43 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
APH1BQ8WW43 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.25■□□□□ 0.03
APH1BQ8WW43 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
APH1BQ8WW43 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.25■□□□□ 0.03
APH1BQ8WW43 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.25■□□□□ 0.03
APH1BQ8WW43 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.25■□□□□ 0.03
APH1BQ8WW43 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
APH1BQ8WW43 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
APH1BQ8WW43 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.25■□□□□ 0.03
APH1BQ8WW43 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.25■□□□□ 0.03
APH1BQ8WW43 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.25■□□□□ 0.03
APH1BQ8WW43 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
APH1BQ8WW43 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
APH1BQ8WW43 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
APH1BQ8WW43 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
APH1BQ8WW43 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
APH1BQ8WW43 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
APH1BQ8WW43 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.25■□□□□ 0.03
APH1BQ8WW43 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
APH1BQ8WW43 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
APH1BQ8WW43 KRT8P49-201ENST00000604166 1432 ntBASIC15.25■□□□□ 0.03
APH1BQ8WW43 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
APH1BQ8WW43 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
APH1BQ8WW43 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
APH1BQ8WW43 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
APH1BQ8WW43 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
APH1BQ8WW43 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
APH1BQ8WW43 AC002310.6-201ENST00000624451 1377 ntBASIC15.24■□□□□ 0.03
APH1BQ8WW43 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
APH1BQ8WW43 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
APH1BQ8WW43 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
APH1BQ8WW43 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
APH1BQ8WW43 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
APH1BQ8WW43 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
APH1BQ8WW43 SNX33P1-201ENST00000592116 1762 ntBASIC15.24■□□□□ 0.03
APH1BQ8WW43 KRT18P22-201ENST00000402024 1347 ntBASIC15.24■□□□□ 0.03
APH1BQ8WW43 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
APH1BQ8WW43 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.24■□□□□ 0.03
APH1BQ8WW43 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
APH1BQ8WW43 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.24■□□□□ 0.03
APH1BQ8WW43 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
APH1BQ8WW43 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.24■□□□□ 0.03
APH1BQ8WW43 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
APH1BQ8WW43 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.24■□□□□ 0.03
APH1BQ8WW43 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
APH1BQ8WW43 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
APH1BQ8WW43 FER1L4-210ENST00000615531 5998 ntBASIC15.24■□□□□ 0.03
APH1BQ8WW43 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.24■□□□□ 0.03
APH1BQ8WW43 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.24■□□□□ 0.03
APH1BQ8WW43 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
APH1BQ8WW43 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
APH1BQ8WW43 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
APH1BQ8WW43 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.24■□□□□ 0.03
APH1BQ8WW43 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.24■□□□□ 0.03
APH1BQ8WW43 RN7SL606P-201ENST00000472779 293 ntBASIC15.24■□□□□ 0.03
APH1BQ8WW43 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
APH1BQ8WW43 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.24■□□□□ 0.03
APH1BQ8WW43 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
APH1BQ8WW43 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC15.24■□□□□ 0.03
APH1BQ8WW43 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.24■□□□□ 0.03
APH1BQ8WW43 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC15.24■□□□□ 0.03
APH1BQ8WW43 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
APH1BQ8WW43 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.24■□□□□ 0.03
APH1BQ8WW43 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.24■□□□□ 0.03
APH1BQ8WW43 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.24■□□□□ 0.03
APH1BQ8WW43 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.24■□□□□ 0.03
APH1BQ8WW43 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
APH1BQ8WW43 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
APH1BQ8WW43 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.24■□□□□ 0.03
APH1BQ8WW43 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
APH1BQ8WW43 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
APH1BQ8WW43 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
APH1BQ8WW43 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
APH1BQ8WW43 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
APH1BQ8WW43 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
APH1BQ8WW43 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
APH1BQ8WW43 AC099063.4-201ENST00000641099 1602 ntBASIC15.24■□□□□ 0.03
APH1BQ8WW43 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
APH1BQ8WW43 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.24■□□□□ 0.03
APH1BQ8WW43 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.24■□□□□ 0.03
APH1BQ8WW43 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms