Protein–RNA interactions for Protein: Q8TCZ7

LINC00308, Putative uncharacterized protein encoded by LINC00308, humanhuman

Predictions only

Length 52 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00308Q8TCZ7 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC11.26□□□□□ -0.61
LINC00308Q8TCZ7 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
LINC00308Q8TCZ7 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC11.26□□□□□ -0.61
LINC00308Q8TCZ7 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00308Q8TCZ7 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00308Q8TCZ7 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00308Q8TCZ7 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00308Q8TCZ7 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00308Q8TCZ7 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00308Q8TCZ7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00308Q8TCZ7 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00308Q8TCZ7 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC00308Q8TCZ7 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00308Q8TCZ7 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00308Q8TCZ7 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00308Q8TCZ7 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00308Q8TCZ7 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00308Q8TCZ7 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00308Q8TCZ7 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC00308Q8TCZ7 SUPT20HL2-201ENST00000486479 2409 ntBASIC11.26□□□□□ -0.61
LINC00308Q8TCZ7 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00308Q8TCZ7 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00308Q8TCZ7 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00308Q8TCZ7 AC092338.2-201ENST00000568827 1415 ntBASIC11.26□□□□□ -0.61
LINC00308Q8TCZ7 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00308Q8TCZ7 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 HIST1H2APS4-201ENST00000362070 348 ntBASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 TK1-205ENST00000590862 642 ntTSL 3 BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 TBC1D3P5-201ENST00000579401 1545 ntBASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00308Q8TCZ7 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
LINC00308Q8TCZ7 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00308Q8TCZ7 OR2I1P-210ENST00000642037 4691 ntBASIC11.24□□□□□ -0.61
LINC00308Q8TCZ7 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00308Q8TCZ7 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00308Q8TCZ7 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00308Q8TCZ7 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC11.24□□□□□ -0.61
LINC00308Q8TCZ7 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
LINC00308Q8TCZ7 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00308Q8TCZ7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
LINC00308Q8TCZ7 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
LINC00308Q8TCZ7 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00308Q8TCZ7 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00308Q8TCZ7 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC11.24□□□□□ -0.61
LINC00308Q8TCZ7 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC11.24□□□□□ -0.61
LINC00308Q8TCZ7 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
LINC00308Q8TCZ7 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC11.24□□□□□ -0.61
LINC00308Q8TCZ7 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
LINC00308Q8TCZ7 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
LINC00308Q8TCZ7 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00308Q8TCZ7 SP100-205ENST00000409824 1802 ntTSL 5 BASIC11.24□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms