Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.85■□□□□ 0.13
SNIP1Q8TAD8 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SNIP1Q8TAD8 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.85■□□□□ 0.13
SNIP1Q8TAD8 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.85■□□□□ 0.13
SNIP1Q8TAD8 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.85■□□□□ 0.13
SNIP1Q8TAD8 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
SNIP1Q8TAD8 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.85■□□□□ 0.13
SNIP1Q8TAD8 AC007967.4-201ENST00000614700 386 ntBASIC15.85■□□□□ 0.13
SNIP1Q8TAD8 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.85■□□□□ 0.13
SNIP1Q8TAD8 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.85■□□□□ 0.13
SNIP1Q8TAD8 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SNIP1Q8TAD8 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNIP1Q8TAD8 PCDHB18P-201ENST00000524813 2368 ntBASIC15.85■□□□□ 0.13
SNIP1Q8TAD8 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNIP1Q8TAD8 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNIP1Q8TAD8 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNIP1Q8TAD8 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNIP1Q8TAD8 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNIP1Q8TAD8 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNIP1Q8TAD8 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 AL353732.1-201ENST00000569618 1459 ntBASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 AC009477.1-201ENST00000452936 217 ntBASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 AL132655.2-201ENST00000596276 594 ntBASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 AL031055.1-201ENST00000606362 631 ntBASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 NOC2LP1-202ENST00000452600 2235 ntBASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 NOC2LP2-201ENST00000407594 1944 ntBASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC15.84■□□□□ 0.13
SNIP1Q8TAD8 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.83■□□□□ 0.13
SNIP1Q8TAD8 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.83■□□□□ 0.13
SNIP1Q8TAD8 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.83■□□□□ 0.13
SNIP1Q8TAD8 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SNIP1Q8TAD8 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNIP1Q8TAD8 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SNIP1Q8TAD8 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNIP1Q8TAD8 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SNIP1Q8TAD8 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SNIP1Q8TAD8 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
SNIP1Q8TAD8 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.83■□□□□ 0.12
SNIP1Q8TAD8 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNIP1Q8TAD8 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNIP1Q8TAD8 RNU1-129P-201ENST00000384064 167 ntBASIC15.83■□□□□ 0.12
SNIP1Q8TAD8 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SNIP1Q8TAD8 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC15.83■□□□□ 0.12
SNIP1Q8TAD8 RPS2P32-201ENST00000439199 892 ntBASIC15.83■□□□□ 0.12
SNIP1Q8TAD8 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.83■□□□□ 0.12
SNIP1Q8TAD8 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNIP1Q8TAD8 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.83■□□□□ 0.12
SNIP1Q8TAD8 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.83■□□□□ 0.12
SNIP1Q8TAD8 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
SNIP1Q8TAD8 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNIP1Q8TAD8 RARRES2P9-201ENST00000565168 469 ntBASIC15.83■□□□□ 0.12
SNIP1Q8TAD8 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.83■□□□□ 0.12
SNIP1Q8TAD8 U1.21-201ENST00000580816 167 ntBASIC15.83■□□□□ 0.12
SNIP1Q8TAD8 RN7SL275P-201ENST00000582762 335 ntBASIC15.83■□□□□ 0.12
SNIP1Q8TAD8 AL162274.1-201ENST00000617191 1098 ntBASIC15.83■□□□□ 0.12
SNIP1Q8TAD8 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms