Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CPEB3Q8NE35 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CPEB3Q8NE35 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.76□□□□□ -0.05
CPEB3Q8NE35 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CPEB3Q8NE35 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CPEB3Q8NE35 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPEB3Q8NE35 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPEB3Q8NE35 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPEB3Q8NE35 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPEB3Q8NE35 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CPEB3Q8NE35 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CPEB3Q8NE35 AC078925.2-201ENST00000624013 1973 ntBASIC14.76□□□□□ -0.05
CPEB3Q8NE35 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPEB3Q8NE35 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CPEB3Q8NE35 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CPEB3Q8NE35 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPEB3Q8NE35 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPEB3Q8NE35 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CPEB3Q8NE35 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CPEB3Q8NE35 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CPEB3Q8NE35 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CPEB3Q8NE35 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPEB3Q8NE35 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPEB3Q8NE35 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 TOP3BP1-201ENST00000420768 1380 ntBASIC14.75□□□□□ -0.05
CPEB3Q8NE35 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 IL9RP2-201ENST00000423948 1312 ntBASIC14.75□□□□□ -0.05
CPEB3Q8NE35 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 MRPL20P1-201ENST00000400819 433 ntBASIC14.75□□□□□ -0.05
CPEB3Q8NE35 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 FLJ38576-201ENST00000623820 2459 ntBASIC14.75□□□□□ -0.05
CPEB3Q8NE35 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
CPEB3Q8NE35 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
CPEB3Q8NE35 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.74□□□□□ -0.05
CPEB3Q8NE35 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
CPEB3Q8NE35 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CPEB3Q8NE35 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CPEB3Q8NE35 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CPEB3Q8NE35 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.74□□□□□ -0.05
CPEB3Q8NE35 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.74□□□□□ -0.05
CPEB3Q8NE35 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.74□□□□□ -0.05
CPEB3Q8NE35 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CPEB3Q8NE35 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CPEB3Q8NE35 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.74□□□□□ -0.05
CPEB3Q8NE35 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.74□□□□□ -0.05
CPEB3Q8NE35 AL590627.1-203ENST00000421194 1026 ntBASIC14.74□□□□□ -0.05
CPEB3Q8NE35 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CPEB3Q8NE35 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CPEB3Q8NE35 AC107918.2-201ENST00000530817 355 ntBASIC14.74□□□□□ -0.05
CPEB3Q8NE35 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.74□□□□□ -0.05
CPEB3Q8NE35 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.74□□□□□ -0.05
CPEB3Q8NE35 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.74□□□□□ -0.05
CPEB3Q8NE35 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
CPEB3Q8NE35 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CPEB3Q8NE35 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.74□□□□□ -0.05
CPEB3Q8NE35 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms