Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
C11orf42Q8N5U0 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 AP002414.1-201ENST00000391405 1147 ntBASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 AC098831.1-202ENST00000438821 336 ntBASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 PAWRP1-201ENST00000451083 565 ntBASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 RPS15P9-201ENST00000494093 319 ntBASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 AC117500.6-201ENST00000624871 588 ntBASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 PGM5P2-202ENST00000637225 1043 ntBASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
C11orf42Q8N5U0 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 AC092053.1-201ENST00000605787 1936 ntBASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 AC079776.4-201ENST00000511039 504 ntBASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 IGHV3-65-201ENST00000523210 341 ntBASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 AC008667.4-201ENST00000607370 168 ntBASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 BX640515.1-201ENST00000617215 977 ntBASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 IL9RP2-201ENST00000423948 1312 ntBASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 AC068587.6-202ENST00000641839 5619 ntBASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 AC126755.1-201ENST00000525846 6405 ntBASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
C11orf42Q8N5U0 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
C11orf42Q8N5U0 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
C11orf42Q8N5U0 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms